Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02123 ATGAAGGCCGTGCCCCTACCCTTTCAGGAATTTAGAGGAAACGGGGTGTTAGATTTTGCTTCTGGTGCTGTTGCTGTTTCAGATTCGCTGTTACTCCCACAGCAAGAGCAATTTCTGCAAAGGTGGAATCCCCACAGGGAAAACTATTGCTATGTGGGCATTGAGCCCACTTCTGGTTTGGACCTCAAAAGGAAAACAAGCCCTCCCACTTCCTCCTCTACACTGTCTTCTTCACGCGGCAGCAGCGGCTGCGGTGGAGGGTGCGGCTCGACCGATAGCACCACCGGCGCTGGAGCACCGAAGGTCTCGACTGAGAAGGAGAACAACCCACCTCAAGCAGGGTTAGAGGTTGCACAGGGAAGATGTGGGTTGGGAATGGAGGATTGGGAGAGTGTGTTGTCTGAGTCATCTGGTCAGGATAATTCCATTTTGAAATTGATTATGGGGGACATTGAGGACCCATCTCTGGGATTGACCAAGCTTTTGCAGGGTGGAAGCGCCTCTCAGGATGTTGAGTTCAATGGGGTTGGAGTGGGTTTTAGTTTGGTGGATCAAAGTTCTGTGCTTGATCCCATTACCAGTGTCAACTTTGTGACCAACATTGATCCCTCTGGTCATGGGAATTGTTCCGACTTCCCTTTCAATTCCCATACTAATGTTAACTCCAATATTTCCAGAGTTGGTTCTGGTGTGAATCCGCCTAACCCTGGGTTCCCTGATTCGGCTACCAATCTCTCACCAGTTTCACTCCCTCAGGGTGTTTTTCAGCCACAACAACAGCATCCAGCAATGGAACCTCTGGATGAGAAGCTGCAAGTTCTCTATCCCCAGTTTATTTTGAACCAAAATCAAACTCAGTTTATGGCAAACCCAGGTTCGGTTTTGCCTTTGAATTATGCTCAGTTGCAAGAACATCATCAGCTTCTCCCACAGCCTCCGGCAAAACGCCTGAATTGTGGCCCAAATTATCAGGTTCCTAAGGCACCCTTCTTGGACTCTGGCCAAGAGCTGTTACTACGGAGGCAGCAACAGCAGCTTCAACTGCTCCCTCACCATCTGCTGCAGAGGTCATCCATGGTGGTGGCCCCAAAGCAGAAAATGGCGAGCCCCAGCGGTGAAGATTTGGCAACCCACCAGCTTCAACAGGCTATAACTGAACAGCTTTTCAAGGCTGCAGAGCTGATCGATGCCGGTAATCTGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAACTTTCCCCCTTTGGGAGGCCTTTTCAGAGGGCTGCTTTTTATTTCAAAGAGGCCTTGCAATTAGGACTTCATTCAAATTCCAACAACAGTTCTATGACCTTCTCACCCACAGGCCTTCTGCTCAAAATTGGTGCTTACAAATCATTCTCAGAAATCTCACCAGTTCTGCAGTTTGCCAATTTCACTTGTAATCAAGCACTGCTTGAAGCTGTGGAAGGGTTTGATCGCATTCACATAATAGATTTTGATATTGGGTTTGGTGGACAGTGGTCTTCTTTCATGCAAGAGTTAGCACTGAGAAACGGAGGTGCACCTGAACTCAGGATCACAGCATTTGTGTCACCCTCCCACCATGATGAAATTGAGCTCAGTTTCACTCAGGAGAATTTGAAGCAATATGCTGGCGAGATAAACATGTCCTTTGAGCTTGAGATTTTGAGCTTTGAATCTTTAAATTCTGCCTCCTGGCCCCAGCCACTTCGTGATTGTGAAGCTGTGGTGGTTAACATGCCTATTGGCTCATTCTCAAGCAACCCATCATATCTTCCTTTGGCCCTTCGCTTTGTGAAGCAGCTCATGCCAAAAATTGTTGTTACATTGGATAGAAGTTGCGATCGAACTGATGCACCATTTCCTCAGCATCTGGTTTTTGCCCTTCAATCTTATTCAGGGCTGCTTGAATCACTTGATGCCGTTAATGTTCACCCAGATGTCCTTCAGATGATTGAGAAGTATTATCTTCAACCAGCAATGGAGAAGCTTGTTTTGGGCCGACATGGTTTTCAGGAAAGAACACTTTCTTGGAAAAACCTTCTCTTGTCATCTGGGTTTTCACCATTGACCTTCAGTAACTTCACAGAATCTCAAGCAGAGTGTTTGGTGCAGAGGACTCCTGGTAAGGGATTCCATGTTGAGAAAAGACAGTCTTCCCTGGTTCTTTGCTGGCAAAGGAAGGATCTCATCTCAGTTTCAACCTGGAGATGCTGA 2226 0.4744 MKAVPLPFQEFRGNGVLDFASGAVAVSDSLLLPQQEQFLQRWNPHRENYCYVGIEPTSGLDLKRKTSPPTSSSTLSSSRGSSGCGGGCGSTDSTTGAGAPKVSTEKENNPPQAGLEVAQGRCGLGMEDWESVLSESSGQDNSILKLIMGDIEDPSLGLTKLLQGGSASQDVEFNGVGVGFSLVDQSSVLDPITSVNFVTNIDPSGHGNCSDFPFNSHTNVNSNISRVGSGVNPPNPGFPDSATNLSPVSLPQGVFQPQQQHPAMEPLDEKLQVLYPQFILNQNQTQFMANPGSVLPLNYAQLQEHHQLLPQPPAKRLNCGPNYQVPKAPFLDSGQELLLRRQQQQLQLLPHHLLQRSSMVVAPKQKMASPSGEDLATHQLQQAITEQLFKAAELIDAGNLELAHGILARLNHQLSPFGRPFQRAAFYFKEALQLGLHSNSNNSSMTFSPTGLLLKIGAYKSFSEISPVLQFANFTCNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPELRITAFVSPSHHDEIELSFTQENLKQYAGEINMSFELEILSFESLNSASWPQPLRDCEAVVVNMPIGSFSSNPSYLPLALRFVKQLMPKIVVTLDRSCDRTDAPFPQHLVFALQSYSGLLESLDAVNVHPDVLQMIEKYYLQPAMEKLVLGRHGFQERTLSWKNLLLSSGFSPLTFSNFTESQAECLVQRTPGKGFHVEKRQSSLVLCWQRKDLISVSTWRC 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02123 741 MobiDBLite consensus disorder prediction 63 110 - -
Viun5g02123 741 MobiDBLite consensus disorder prediction 60 116 - -
Viun5g02123 741 ProSiteProfiles GRAS family profile. 375 740 IPR005202 -
Viun5g02123 741 Pfam GRAS domain family 385 740 IPR005202 -
Viun5g02123 741 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 352 736 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02123 Viun-Chr5 26402432 26405521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02123 384 741 GRAS Transcription Factor Family AT4G00150 59.834 3.82e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun5g02123 GRAS 8.2e-92 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02123 - - gmx:100805945 1218.37