Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02104 ATGGCTTCATCTTCCCGGAATGCTATGATGTACTACCATCCATTTTGGGAATACATTCAATTTGACCCTGGTTTCGTTGTTTACTGGTCAAAGGAAGTTAGACACAATCTAAACTACTTAGTGGACCCAAGAGGAAATAAGATAGTTATCCGCATAGGTCAAACTTCAGTGCCTGAAAACTTCTTTTGTGGAGGTTATGAAATAGCAAGTTTTTACAAGTTGAAAGAAAACTATTTTGTTGCAATCAAATACTTAGGAAACAGAGTATTTGACTTAAGGATTTTTGATACTGACATGACTGAAATCCAATACCCTGCCCCAAAAAATCCGACAGATGTCCACCCAGAAATCCCATTACCCAGATTCTTCAACTGTTTCAATGTCAAATTATCCATACAACAGGAATCTATAACACTTGCTGATGCATTCTCACGGTTTTGGGATCCAACATTTGCGTCTGATAACTTTGAGATGATTGATCCATACTTGGATGCACAATTTGCTGATGTAGCCTTGGTAAAGAGTCAAACAAGCTATAACCTCAGCAATGAAAGTGGTGATTTATGGGAATGTAATATTAGATGGAGTAACAGATCGGGTATGGGATGCTACATCACTCAAGGATGGAACCAGTTCTGCATTGATAATGGACTTGAAGCTGGAAACAAAGTGATGTTTGGAGTTGACAAAAACCGTTCAAGGACAATTCATGTTTTAATCACTTAA 726 0.3774 MASSSRNAMMYYHPFWEYIQFDPGFVVYWSKEVRHNLNYLVDPRGNKIVIRIGQTSVPENFFCGGYEIASFYKLKENYFVAIKYLGNRVFDLRIFDTDMTEIQYPAPKNPTDVHPEIPLPRFFNCFNVKLSIQQESITLADAFSRFWDPTFASDNFEMIDPYLDAQFADVALVKSQTSYNLSNESGDLWECNIRWSNRSGMGCYITQGWNQFCIDNGLEAGNKVMFGVDKNRSRTIHVLIT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02104 241 ProSiteProfiles B3 DNA-binding domain profile. 146 241 IPR003340 GO:0003677
Viun5g02104 241 Gene3D - 141 241 IPR015300 -
Viun5g02104 241 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 67 232 IPR039218 -
Viun5g02104 241 SUPERFAMILY DNA-binding pseudobarrel domain 162 238 IPR015300 -
Viun5g02104 241 Pfam B3 DNA binding domain 152 239 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02104 23 231 REM Transcription Factor Family AT2G24700 23.077 2.23e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Viun5g02104 B3 2.8e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02104 - - vun:114184526 510.76