Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02103 ATGGCGAAGAAGTTGGATATGATTAAAGATATTGATGGTAAGAGGGAAACTCTGAAGTTGGGAGTTAGAGTTGTTGATCATTGGTATGTTCAGTCCCGTGATTCTACTCTTCAATTGGAGATGATTCTGATGGATGAAAATGCGGACAAAATACATTGCATTGTTCGCAGGGAAGAGTTTGATTTATGGGATAGCAAGTTGATTGAGGGAGAAACATATATAATGCACAATTTCAAGATATTGAAAAATGAAGGGCAGTATAGGGTATGTGAGCATCCTTACAAGTTACTGTTTATTGGTGCTACATCCGTCAAGTTGCAAGCTATTGCTAAACTTCCAATGAAAGCTTACAACTTTAAAAGTATAAAAGATATTGTTAGTGGCAATTTTATTCCTGACTTGCTTATAGACTTGATTGGTGTCGTTGAGAATGTGAGAATTAAGCCTCAGTTTAAAAGTGTAGAGTCGAAAAACGTGGTGTTTACTTTGGTGGATCTCAGTGGTGCTGCTATTTGTTGTACATTGTGGGATGAATATTGCAAGAAATTTATACAGAGGTACAATGACGTAGCTAATTGGGAAAAGCTTGTGGTTGTCATTACTCAAGCAAAAATCAAACCAGCTGCAGGTGAATGGCCAGTTTCTGTTTCTAATACGTGGAATGGTACAAAGTTGATAATGGAAAGTGATTTTCCTCAAATAGTTGATTTTAAGAAACGAATGAAGGAGTATAGGCTCCAGGTCCAGGTCTGTGATGATTCAAACAATTATGCTAACTTTGTTGTATGGGACCAAGAATGTAGCAACATTATTGGGTTGTCTGCTGCTGATTTGCAGAAACAAATGATTGAGGCTGGTGAAGATGATCCCCTTTGCTTTCCTGATGCATTGGATGTAATGCTAGGCTGTACCTTTGCTTTTAAAGTTCGAACGCAACCAAGAACTAAGTGTGCATCTGTCATTAAAGTTTCAAATGTTTCAGAAATAGTGGCACATGTTAAAAGTCTTATTCCTCCACTTCAAATTGGTTATGGTACTGATAAATGCAGTATGGATTTAGTTTCTGAGAGTTCCTGGTAA 1080 0.3731 MAKKLDMIKDIDGKRETLKLGVRVVDHWYVQSRDSTLQLEMILMDENADKIHCIVRREEFDLWDSKLIEGETYIMHNFKILKNEGQYRVCEHPYKLLFIGATSVKLQAIAKLPMKAYNFKSIKDIVSGNFIPDLLIDLIGVVENVRIKPQFKSVESKNVVFTLVDLSGAAICCTLWDEYCKKFIQRYNDVANWEKLVVVITQAKIKPAAGEWPVSVSNTWNGTKLIMESDFPQIVDFKKRMKEYRLQVQVCDDSNNYANFVVWDQECSNIIGLSAADLQKQMIEAGEDDPLCFPDALDVMLGCTFAFKVRTQPRTKCASVIKVSNVSEIVAHVKSLIPPLQIGYGTDKCSMDLVSESSW 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02103 359 Gene3D - 3 106 IPR012340 -
Viun5g02103 359 SUPERFAMILY Nucleic acid-binding proteins 8 105 IPR012340 -
Viun5g02103 359 Gene3D - 111 247 IPR012340 -
Viun5g02103 359 SUPERFAMILY Nucleic acid-binding proteins 117 242 IPR012340 -
Viun5g02103 359 SUPERFAMILY Nucleic acid-binding proteins 243 329 IPR012340 -
Viun5g02103 359 CDD RPA1_DBD_B_like 137 242 - -
Viun5g02103 359 Pfam Domain of unknown function DUF223 40 126 IPR003871 -
Viun5g02103 359 CDD RPA1_DBD_A_like 19 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02103 Viun-Chr5 25459288 25461636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02103 77 233 Core DNA Replication Machinery Family AT2G06510 25.767 9.81e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02103 - - vun:114163466 563.148