Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02096 ATGTCCAAGATTCGCGGATTCAACCTCAGGAAGCGCCTCATCCGGGTCTCCAAATGGGTCTTCAGGAAGATCCGGGTCCGGAGCGGACCCGGATACCATCGCCTGGGCAACTCTCCTCGGTCGTCCATCGCTAAACTCCTCTCGTGGGGTCGCAAGCTGACGGCGGCCGCCAAGTCCTTCTTCCCAGTATCAGTCGGGTCGGGTTACGCCCAATTGGGATCTGGTTCCGTGGTAGGATCCGACCGGGACCCGACTGTGCCCAAGGGACATCTCGCCGTATACGTGGGGCAGAAGGATGGCGAGTTGCACCGCGTGCTGGTGCCGGTAATATACTTCAACCATCCTTTGTTCGGGGAGTTGCTGAAGGAGGCAGAGGAGGAGTTCGGGTTCCACCACGACGGTGGAATCACCATCCCCTGCCGGTTCACTGAGTTTGAACGGGTCAAGACCCGAATAGCGTCCGGGTCTCGTCGGAGCAACCGTCCAAAAAGGTTTGCCTGA 501 0.5928 MSKIRGFNLRKRLIRVSKWVFRKIRVRSGPGYHRLGNSPRSSIAKLLSWGRKLTAAAKSFFPVSVGSGYAQLGSGSVVGSDRDPTVPKGHLAVYVGQKDGELHRVLVPVIYFNHPLFGELLKEAEEEFGFHHDGGITIPCRFTEFERVKTRIASGSRRSNRPKRFA 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02096 166 Pfam Auxin responsive protein 80 149 IPR003676 GO:0009733
Viun5g02096 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 66 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02096 Viun-Chr5 25332809 25333945 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02096 84 145 Calmodulin-binding Proteins AT3G43120 53.226 1.28e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02096 K14488 - gmx:100783436 263.077