Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02070 ATGAAGTTCCCTAACATTCGTTTTCGTCACTCTAGCATTCACTTATCCCACGTTCCCAAATGCACCTTTGTACCCTACATCTCTACCAAATCCCAAACCCACTTTTTGTCCTCATTGCCACCGGTTTGCTCCGAAACCTTCCGAATCATTGCCCCAAAATCCAGGTTGCTCGGTCCCCTGTTCGCAAAACGGGTCGGGCTTTTGACATCAATTTTACCCGGTGGAAGCTGGTGGGCCTTGCCGGAGCTCCGGGAAGACGGCGTGGAGCCAACGGCGGCGTTGATTGCTCTCCGGCGAATATGGGAATTGGTCGCCGATGAGCGATGGGTCGCGTTTGTGGCGGTTGGGTCCCTTGTTATTGCTGCTCTTTCAGAGATCTCCATGCCAAGTATATTGGCAGCATCAATATTTTCAGCACAGAGTGGTGAGACTGTGGTGTTCTCTAGGAATGCACTGTTTTTACTTCTTTTGTGTGTAACTTCAGGGATATGCAGCGGCCTACGATGTGGCTGCTTTGGAATTTTGAATGTAACCTTGGTAAAGCATCTACGAGAAAACTTATATGCAACAATTCTTTTTCAGGACATCTCCTACTTTGATAAAGAAAGAGTTGGTGACTTGACAAGCAGGCTCACAGCAGATTGTCAACGATTATCCCATGTAATAGGAAATGATCTTCAGCTGATATTACGCAACACTTGTCAGGGGACTGGAGCAATACTTAATTTGATGGTTTTATCTTGGCCTCTAGCATTATCTGCCTTGGTGATTTGTTCTATTTTATCTGCAATTTTTCTTGTTTATGGCCAGTATCAGAGAAAGGCTGCAAAGTTAATCCACGATTTCACAGCTTGTGCAAATGACGTTGCTCTGGAGACACTTTCTTCAGTAAGAACTGTACGAGCTTATGGAACAGAAAAAAGAGAATTTGGAAGGTACAAGCAGTGGCTACAAAGCTTAGCACTTATTACTCTTCGACAGAATATGGTTTCAGGGCTTTGGGACCTAATATTTAGCACCTTATACCGTTCTATGCAGATGCCTGTTCTAGAACACTTGGACTTCTCCATCAGAGGAAAATCAAGTCATTGCCATTCTCTACCTTGCCAAGGTTGGTCTGAGTGGTAG 1128 0.4486 MKFPNIRFRHSSIHLSHVPKCTFVPYISTKSQTHFLSSLPPVCSETFRIIAPKSRLLGPLFAKRVGLLTSILPGGSWWALPELREDGVEPTAALIALRRIWELVADERWVAFVAVGSLVIAALSEISMPSILAASIFSAQSGETVVFSRNALFLLLLCVTSGICSGLRCGCFGILNVTLVKHLRENLYATILFQDISYFDKERVGDLTSRLTADCQRLSHVIGNDLQLILRNTCQGTGAILNLMVLSWPLALSALVICSILSAIFLVYGQYQRKAAKLIHDFTACANDVALETLSSVRTVRAYGTEKREFGRYKQWLQSLALITLRQNMVSGLWDLIFSTLYRSMQMPVLEHLDFSIRGKSSHCHSLPCQGWSEW 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02070 375 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 112 341 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun5g02070 375 PANTHER ABC TRANSPORTER B FAMILY 103 346 IPR039421 -
Viun5g02070 375 SUPERFAMILY ABC transporter transmembrane region 98 343 IPR036640 GO:0005524|GO:0016020
Viun5g02070 375 Pfam ABC transporter transmembrane region 116 333 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Viun5g02070 375 Gene3D ABC transporter type 1, transmembrane domain 92 349 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02070 Viun-Chr5 24701386 24723500 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02070 108 308 Calmodulin-binding Proteins AT2G36910 22.705 2.76e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02070 - - pvu:PHAVU_008G153500g 573.548