Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02052 ATGGACCATGACATGTTACCATTTGTTCTTTTAGCTTTCCCCATCTTGCTATTATTCGTGTTACGAATACGAAAAACATCTAAGAAACCACCCTTTCCACCAGGCCCTAGAGGTCTTCCTTTCATTGGCAATCTTTATCTACTCGATAGTTCTACTCTTTGTTTGAAGCTCTATGAACTCTCCAAAAAATATGGTCCCATCTTTTCTCTTCAACTGGGTTCAAGGCCAGCCATTGTTATCTCCTCACCAAAATTAGCCAAGGAGGTAATGAAAACCCACGACCTTGCCTTCTGTGGTCGACCCTCTCTCCTATGCTCAATGAAACTTTCCTACAATGGGTTAGACATGGCATTTTCACCCTACAGAGATTATTGGAGACACACCAGAAAAATTTCCATCATCCACTTCCTTAGCCTGAAGCGTGTTCTAATGTTTTCCCCGTTCAGAAAATGTGAGGTTTCCCATTTGGTGAAAAAGATATCGGAGCACGCTTCTTCTTCCAAGGAGACGAACTTGCATGAGCTCCTCACTTGTCTCACAAGCGCTGTAGTGTTGAGAACTGCTCTGGGAAGAAGGTATGAAGAGGAAGGAATCGAGAAAAGCATGTTCCATGATCTTCTTAGAGAAGCGCAGGAATTGGTAGCTTCAACTTTCTACACAGATTACATTCCTTTTGTTGGTGGTGTGGTTGATAAACTCACTGGGTTGATGGGTCGTCTCGAGAAAATGTTTAAACTGTTGGATGGGTTTTATCAGAACGCCATCGATGAACACCTTGATCCTGAAAGGAAGAAACTTACCAATGAAGGCGATTTCATCGATGCATTGCTTCAACTGAAGAATGACCGTTCCTTCTCCATGCATCTCACTCCTTCTCACATCAAACCCTTGATCATGAATATGATTTTAGCCGGGACAGACACAATTGCAGCCGCAGTAGTTTGGGCTATGACGGCACTGATGCAGAACCCGAGAGTGATGAAGAAAGCCCAAGAAGAGATCGAAAATGGGTTTGGTGGGAAAGATTTTATAGAGGAAAATGATATTGAAAAGCTTCCTTATCTTAAGGCAGTTATAAAAGAAACGATGAGATTATACCCACCTCTGCCTCTGCTTGTAGAAAGGGAAACGATTAAAAAGTGTAGCATCAGAGAGTACGAAATTCCGGAGAAGACATTGGTGTATGTGAATGCTTGGGCAGTGCATAGAGACCCAGAAACATGGAAGGAGCCAGAAGAGTTTTATCCTGAGAGGTTCTTGAACAGCAAAATAGATTTTAGGGGATATGATTATGAGCTGATTCCATTTGGCGTTGGGCGAAGGATTTGCCCAGGCATACACATGGGAGTTATCACAATGGAGCTTGTGCTTGCTAATCTTCTGCATTCATTTGATTGGGAAATGCCTCAAGGGATGGAAAGGGACGACATAGATACTGATATGCTTCCTGGACTTGTCCAACATAAGAAAAACCCTCTCATCCTAGTTGCAAAAAAGCGAGAATGA 1506 0.427 MDHDMLPFVLLAFPILLLFVLRIRKTSKKPPFPPGPRGLPFIGNLYLLDSSTLCLKLYELSKKYGPIFSLQLGSRPAIVISSPKLAKEVMKTHDLAFCGRPSLLCSMKLSYNGLDMAFSPYRDYWRHTRKISIIHFLSLKRVLMFSPFRKCEVSHLVKKISEHASSSKETNLHELLTCLTSAVVLRTALGRRYEEEGIEKSMFHDLLREAQELVASTFYTDYIPFVGGVVDKLTGLMGRLEKMFKLLDGFYQNAIDEHLDPERKKLTNEGDFIDALLQLKNDRSFSMHLTPSHIKPLIMNMILAGTDTIAAAVVWAMTALMQNPRVMKKAQEEIENGFGGKDFIEENDIEKLPYLKAVIKETMRLYPPLPLLVERETIKKCSIREYEIPEKTLVYVNAWAVHRDPETWKEPEEFYPERFLNSKIDFRGYDYELIPFGVGRRICPGIHMGVITMELVLANLLHSFDWEMPQGMERDDIDTDMLPGLVQHKKNPLILVAKKRE 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02052 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Viun5g02052 501 CDD CYP71-like 63 493 - -
Viun5g02052 501 PANTHER CYTOCHROME P450 71B11-RELATED 17 498 - -
Viun5g02052 501 SUPERFAMILY Cytochrome P450 33 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 Pfam Cytochrome P450 33 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun5g02052 501 FunFam Cytochrome P450 83B1 19 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02052 Viun-Chr5 24360211 24362062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02052 23 499 Cytochrome P450 AT4G31500 46.362 1.23e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02052 - - gmx:100803017 858.211