Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02049 ATGAAAAGACTTTCTACATGGATAGCATTTGCCACATTCCTTTTCCTCCTAAACACGACCACTTGTGTAGAGTACGAGGTGAAGAGAACACTGATACAATTTCTGGCACAAGTCTCGGGTAAAGATGGCCAACAGAACTCCACTTTGTTATGGAAACAAGACGCTGATCCCTGCAATGGCCCCTGGCAAGGTGTACACTGTGATCCTCAAAACATGTCCATAAAAAAGTTGCTACTTGACAACCTCAATTTCTCAGGAACACTTGATCTTGCTATGCTTTGCAACTTGCAGCCCCTGGCTGCATCTCTCACATATCTTACCCTTGATGGCAACAAAATTAGTGGGGTGATAGCCTCTGAGGTTGGAAATTGTAAACAACTCACTCGCCTGCATCTAAGTGGAAACCAACTTGCTGGACACCTTCCTAGTTCACTTGCTATGCTGAACAATTTGAAGAGATTGGACATTTCAAATAACCAGTTTTCAGGATATTTACCAGACTTGCCTAGAATCTCAGGGCTGAGCGTGTTCCTTGCACACAACAATTACCTCGGAGGAACTATACCTGCTTTTGAGTTCTCTAATTTTGACCAATTCAATGTCTCCTTCAACAATTTCCATGGCCATATTCCAAACGTGCATGGCTATTTCTCTGCTGAAAGCTTTCTTGGTAATCCTGAACTGTGTGGTGATCCACTACCAAAGAATTGCTCTGATCAGCATATGCCTATTACTGAGGCTCCGACATCAGAAAAACCAAAGGGTGCTTCTAAGGAGCAGATTCTTATGTACTCAGGGTATGCTGCATTGGGTGTCATCATTGTCCTTTTCGTAGTCTTAAAGCTGTGTAGAAGAAAGAAGGGAGAGAAAAAAGTTGAAGCATTGAATAATAGGGTAGGGGGTGGTGGTGGTGGTGTTGAAAAGCCGAGAAATGTTTCAAGTGAATACAAAAGTGAGGTAAGTAGATCTGAGTTTTCAGTCCCTTCTGAAAGTGGGGTGGTTTCACAATCACTGGTGGTTCTTTCGAGCCATGCGGCAATGGAACTGAGATTGGAGGAGTTGTTGGGAGCACCTGCAGAACTGATTGGAAGAGGAAAAAATGGAAGTCTTTATAAGGTGATGCTTGACAATGGGATAATGGTAGTTGTGAAAAGGATCAAGGATTGGACTATTTCAAGCCACGATTTCAAACAGAGAATGCGAATACTGAGCCAAGCAAAGCACCCTCATGTTCTGCCACCACTTGCTTTCTATTGTTCTAGACAAGAGAAGCTTTTGGTGTATGAATATCAGCAGAATGGCAGTTTATTCAAGCTCCTACATGGCAGTACAAAAGCCTTGGACTGGAGCAGCAGACTTGGGATTGCAGCTACAATTGCTGAGGCATTAGCTTTCCTGCACCAAGAGGTAGGCCATCATGGTATTGTTCATGGAAATTTGAAATCCTCCAACATTTTGCTAAACAAGAATATGGAGGCATGCATAAGTGAATGTGGCATTATGGATATGGATGATCAAAGAGGTTCACCTTCTGGCACTTCTACTGATGCTGGTGCATTAGATATCTTAAAGGGAGATGTTTATGGGTTTGGTGTGATTGTTCTTGAACTGCTTACTGGTAAGTTAGTGAAGGGAAATGGGATTGACTTGACTGATTGGGTTCAGTCAGTTGTGAGGGAAGAATGGACAGGTGAAGTCTTTGACAAGTCTCTGATATCAGAGTATGCAAGCGAAGAAAGAATGGTGAATTTGCTTCAAGTGGCTATAAGATGTATCAATCCTTCACCACAGGCAAGGCCAACCATGAACCAAGTTGCTCTCATGGTTAACACTATCAAAGAGGAAGAAGAAAAATCATTGATCTATGAAGTGTGA 1875 0.4256 MKRLSTWIAFATFLFLLNTTTCVEYEVKRTLIQFLAQVSGKDGQQNSTLLWKQDADPCNGPWQGVHCDPQNMSIKKLLLDNLNFSGTLDLAMLCNLQPLAASLTYLTLDGNKISGVIASEVGNCKQLTRLHLSGNQLAGHLPSSLAMLNNLKRLDISNNQFSGYLPDLPRISGLSVFLAHNNYLGGTIPAFEFSNFDQFNVSFNNFHGHIPNVHGYFSAESFLGNPELCGDPLPKNCSDQHMPITEAPTSEKPKGASKEQILMYSGYAALGVIIVLFVVLKLCRRKKGEKKVEALNNRVGGGGGGVEKPRNVSSEYKSEVSRSEFSVPSESGVVSQSLVVLSSHAAMELRLEELLGAPAELIGRGKNGSLYKVMLDNGIMVVVKRIKDWTISSHDFKQRMRILSQAKHPHVLPPLAFYCSRQEKLLVYEYQQNGSLFKLLHGSTKALDWSSRLGIAATIAEALAFLHQEVGHHGIVHGNLKSSNILLNKNMEACISECGIMDMDDQRGSPSGTSTDAGALDILKGDVYGFGVIVLELLTGKLVKGNGIDLTDWVQSVVREEWTGEVFDKSLISEYASEERMVNLLQVAIRCINPSPQARPTMNQVALMVNTIKEEEEKSLIYEV 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02049 624 PANTHER OS05G0588300 PROTEIN 9 614 - -
Viun5g02049 624 Gene3D Ribonuclease Inhibitor 21 237 IPR032675 -
Viun5g02049 624 SUPERFAMILY Protein kinase-like (PK-like) 360 608 IPR011009 -
Viun5g02049 624 ProSiteProfiles Protein kinase domain profile. 356 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02049 624 Gene3D Transferase(Phosphotransferase) domain 1 432 623 - -
Viun5g02049 624 Gene3D Phosphorylase Kinase; domain 1 333 430 - -
Viun5g02049 624 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Viun5g02049 624 SUPERFAMILY L domain-like 48 216 - -
Viun5g02049 624 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Viun5g02049 624 Pfam Protein tyrosine and serine/threonine kinase 360 606 IPR001245 GO:0004672|GO:0006468
Viun5g02049 624 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02049 Viun-Chr5 24263216 24266593 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02049 55 616 Receptor kinase-like Gene Family AT2G36570 33.758 2.14e-87 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun5g02049 PK_Tyr_Ser-Thr 4.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02049 - - gmx:100813796 968.378