Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02033 ATGTCTGTTATCCAAAAACACACTCACTCTTTACAAGAACTAAACCCTGAGAAGGAGAGTTGGAATATCCTTGCAAGAGTTGTAAGGTTATGGTTTGTTGAAGATTACACAAAAGGAAAAACTCCATTTTCCATGGAAATTGTTCTTCAAGACCAAGAGGGTGTACTAATCCATGCATCTGTTAGACGCACATTGATATACAAATTCCAGTCTGAAATCAAAGAGGACAAGGTTTACACCATCCAATCTTTCAGAGTTTCATGTAATGGTGGTTCTTATAGAACCACAAAACATGCCTATAAGATCAACTTCCAATTTGGAACCAAGGTCAATATGGTGCAAAGTACCTTAGTTCCGAAAACTACAACTTCATACACCCCTTTTTCAACCATCATAGTTGATGGTTTTGACACAGATTACTTAGTTAATGTGATTGGGATGTTTACTGGTGTTGGAACAGAGCGGGAGCTAGAGAAAGCTGGTAAGAAAACTAAAATGAATGTCATCCTTATTGAAGCTGATGTGTAA 528 0.3731 MSVIQKHTHSLQELNPEKESWNILARVVRLWFVEDYTKGKTPFSMEIVLQDQEGVLIHASVRRTLIYKFQSEIKEDKVYTIQSFRVSCNGGSYRTTKHAYKINFQFGTKVNMVQSTLVPKTTTSYTPFSTIIVDGFDTDYLVNVIGMFTGVGTERELEKAGKKTKMNVILIEADV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02033 175 Pfam Domain of unknown function DUF223 46 141 IPR003871 -
Viun5g02033 175 CDD RPA1_DBD_A_like 26 110 - -
Viun5g02033 175 Gene3D - 6 112 IPR012340 -
Viun5g02033 175 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02033 Viun-Chr5 23394682 23395424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02033 3 151 Core DNA Replication Machinery Family AT5G08020 24.359 5.11e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02033 - - vun:114163676 340.117