Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g02015 ATGAACACCGAAAGCATCACCTCAAATCTAAGCCACCACCACCACATCAACCCGTCATCATGGGTTCTCTTGGCCGCACTTTTTCTCTCGTCTTTGTCCTTCTCTCTCTCCGATCCAAGAATCACCGAAGCAGGGCTCTACTGTGGAACCACCAAGGCCCCTCTGAAAGCCAACTACATCCCAAGTTTCACCAAGGAAATGGAGAGCCTCTCGCAGTTGGTGACCAACCACAACTGGGGCACTCACTTTGTGAACACTTCAGGCTCGCCGATTCCCATTTATGGCTTTGCACAATGCTTCAATGACTTGTCCAACACCGATTGTCTTCTCTGCTACGCGGCAAGCCGTACCAAGATTCCACGCTGCCTTCCTTCTGTCTCTGCGCGCATCTACCTTGATGGCTGCTTCTTGCGCTACGATAACTACAGCTTCTATGCGGAGGTCAGTGACCCTTTGAGGGATACAGTGAACTGCACCTCACAGCATGGAACGGTTGTTGATGAAACTGAGAGGTTGGAACTTGAGGAGAGCGTTGGAAGGGTGGTTGAGACTGTCACCAACAAGGCTCTGGCAAAAGGTGGTGGCTTTGCTGTGGGAGAGGTTGAAGGGGTTTATGCATTGGCACAGTGCTGGAACACCATTGGGAGTGATGGGTGCAGAGAGTGTTTGAGGAAAGCTGGCAAGGAAGTGAGAGGGTGCTTGCCAAAGAGGGATGGGAGGGCCTTGAATGCTGGCTGTTATTTCAGATATTCGACAAACAAGTTCTACAATGAAGATGGCGATGCAGATGGTAAAAATGGATTGTTAAGAAGAGGAGGAGTCATAGTAGCAGAAGTGTTAGCAGCAGCTGCAGCTTTAATGCTTACTGTCTCTGCCTCCTATGTAGCCTTCACAAAGTTAACTAGGATTAAAAAAGAAAACAATAATGTTGGTCAGATTCCCTCTTCCATAAGCAAATCTAGCTTGAATTACAAGTACGAAACTCTTGAGAAGGCCACGGATTACTTTAACTCTTCAAGAAAAATAGGCCAAGGTGGAGCAGGCTCAGTTTTCAAGGGTATTCTCCCAAATGGGAAAGTTGTTGCAGTAAAAAGATTGATATTCAATAACAGGCAATGGGTGGATGAGTTCTTCAACGAAGTGAACTTGATTAGCGGAATTGAACACAAGAACCTTGTCAAACTATTGGGATGTAGCATTGAGGGCCCTGAGAGCCTCCTTGTGTATGAGTACTTGCCCAAAAAGAGTTTAGACCAATTTATCTTTGAAAAAAACAGAACTCAGATTCTAAACTGGAAGCAGAGGTTTAATATCATTCTTGGAACCGCCGAGGGGCTTGCATATCTTCATGAAGGTACCAAAATAAGAATCATTCATCGAGATATCAAAAGCAGCAATGTTCTTCTGGACGAGAATCTCAATCCCAAGATTGCAGATTTCGGCCTTGCCCGGTGCTTTGGAGCAGATAAGTCACATTTGAGCACTGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTACCTAATTAGAGGACAACTTACAGATAAAGCTGATGTGTATAGTTTTGGAGTACTTGTTCTTGAGGTTGTAAGTGGGAGGAGAAACAATGTCTTCCGAGAGGACTCTGGTTCGCTACTACAAACTGTTTGGAAACTTTACCGATCAAACACATTAACTGAAGCTGTTGATCCTTGCTTGGGAGATGATTATCCTGCAACTGAAGCATCAAGGGTGTTCCAAATTGGATTGCTTTGCACACAAGCTTCTGCCTCGCTAAGACCATCCATGTTTCAAGTTGTTTACATGCTACTTAATTCAAATGAAGACGTTCCTACACCGAATCAGCCCCCATTTTTGAACACTGGAATACTGGATTCAGATAGCTCCATTAAGTCTTATAGCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGCATCGTCCTACAGCTACTCAGAGTCCTCTTGTTCAGATGGGCCATCAAGAAGTGAAGAATCAATTGTTCAAGTTTGA 2022 0.4491 MNTESITSNLSHHHHINPSSWVLLAALFLSSLSFSLSDPRITEAGLYCGTTKAPLKANYIPSFTKEMESLSQLVTNHNWGTHFVNTSGSPIPIYGFAQCFNDLSNTDCLLCYAASRTKIPRCLPSVSARIYLDGCFLRYDNYSFYAEVSDPLRDTVNCTSQHGTVVDETERLELEESVGRVVETVTNKALAKGGGFAVGEVEGVYALAQCWNTIGSDGCRECLRKAGKEVRGCLPKRDGRALNAGCYFRYSTNKFYNEDGDADGKNGLLRRGGVIVAEVLAAAAALMLTVSASYVAFTKLTRIKKENNNVGQIPSSISKSSLNYKYETLEKATDYFNSSRKIGQGGAGSVFKGILPNGKVVAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFEKNRTQILNWKQRFNIILGTAEGLAYLHEGTKIRIIHRDIKSSNVLLDENLNPKIADFGLARCFGADKSHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEVVSGRRNNVFREDSGSLLQTVWKLYRSNTLTEAVDPCLGDDYPATEASRVFQIGLLCTQASASLRPSMFQVVYMLLNSNEDVPTPNQPPFLNTGILDSDSSIKSYSTNSFISNALKKIGASSYSYSESSCSDGPSRSEESIVQV 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g02015 673 FunFam Cysteine-rich receptor-like protein kinase 2 412 612 - -
Viun5g02015 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Viun5g02015 673 MobiDBLite consensus disorder prediction 654 673 - -
Viun5g02015 673 ProSiteProfiles Gnk2-homologous domain profile. 41 144 IPR002902 -
Viun5g02015 673 FunFam Cysteine-rich receptor-like protein kinase 2 41 144 - -
Viun5g02015 673 CDD STKc_IRAK 342 604 - -
Viun5g02015 673 ProSiteProfiles Gnk2-homologous domain profile. 153 255 IPR002902 -
Viun5g02015 673 FunFam Cysteine-rich receptor-like protein kinase 3 156 255 - -
Viun5g02015 673 Pfam Salt stress response/antifungal 57 142 IPR002902 -
Viun5g02015 673 Pfam Salt stress response/antifungal 174 252 IPR002902 -
Viun5g02015 673 Gene3D - 156 255 IPR038408 -
Viun5g02015 673 Gene3D - 43 144 IPR038408 -
Viun5g02015 673 ProSiteProfiles Protein kinase domain profile. 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02015 673 Pfam Protein kinase domain 337 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02015 673 FunFam Cysteine-rich receptor-like protein kinase 2 302 411 - -
Viun5g02015 673 Gene3D Phosphorylase Kinase; domain 1 295 411 - -
Viun5g02015 673 SMART serkin_6 336 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g02015 673 SUPERFAMILY Protein kinase-like (PK-like) 319 633 IPR011009 -
Viun5g02015 673 Gene3D Transferase(Phosphotransferase) domain 1 412 615 - -
Viun5g02015 673 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 94 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g02015 Viun-Chr5 22686504 22690230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g02015 6 501 Receptor kinase-like Gene Family AT5G40380 56.137 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g02015 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g02015 - - gmx:100790404 1099.73