Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01926 ATGTCCTTCAATCAATCAAAGTCCGAGAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGCTCCTCCGGCGGTGCGTACGGCAGGGGCGGAGGCGGCGGTGGCGGCGCTGGGCCTTCTCCGTCGCTCTCCTCTAACCGGAGTTTTAACAAGAAGTCTAATAACAATGCACAAGGTGGGCAATCTAGGGTAAACCCTGCACTGGTGAATTCGGCTGAGTCTAATAGCAGTTATGCAGCCCGGACTGTACCAAACGGTTCCCACGTACAGCCACAGATTCATGGAGTATCTGATGCGCCAGTTACAAATGCAACTGCCAAGCCATTTGAATCGTCAGCTGTGCAAAGGAGCACCAGAGCTGTTCCAAAAGCTCCTACCTCTCAACCTCCCTCCATGAGTTCTGATCCAGCAGCTCCTACAACTCCTGCAAAGGCAGATGCATCTAAGGCATTTCCTTTCCAATTTGGATCCATCAGTCCTGGCTTTATGAATGGGATGGCTATTCCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGACGAGCAGAAGCGGGATCAGGCACGACATGATTCTTTTAGACCTGCACCCTCAGTGCCAACACCTCCTGTTCCAAAGCAGCAGGCAGCGAAGAAGGATACAGGTGTTACTGACCAATCTAATACTGGGGAGACTCATACTGGGACTAGGGCAAAAAAGGATACTCAAGTGTCACAATTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTCATTCCTTTAACTGGAATTTCAATGCCAATGCCATACCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAATCTCAAGGTATGTCATCAGCACCTCTTCAGATGCCCTTGCCAATGCCATTGCCGATTGGAAGTGCCACACAAGTGCAACAACCGGTTTTTGTTCCAAACCTTCAACCTCATCCTATCCATCCTCAAGGAATCATGCATCAAGGCCAAAACATGGGTTTCACTCCTCAAATTGGCCCTCAGTTGTCCCATCAGTTAGGCAACATGGGTATTGGAATTGGCCCACAATATCCACCACAGCAAGGAGGAAAGTTTGCTGGTCCTCGTAAAACTACTCCTGTCAAGATAACCCATCCCGAGACACATGAAGAGCTAAGACTTGATAAAAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGTGAGGCCTCATTCTGGTATGGCTTCTCAATCTCAGCCTGCCCAGCAATTTGCAGCTTCTCATCCTATTAGTTACTATCCATCAAGCTCATATGGTACCAATTCTCTCTTTTATCCAACTGCTAGTTCTCTTCCATTAACAAGTAGCCAGATAACACCTAATTCCCAGCCATCCAGATTTAATTATGCTGTGAGCCATGGTCCGCAGAATGTTAGTTTTGTAAATTCATCATCTCATAGTTCTCTGCCTGTTAATAAAGCTGGCACTCCTATTGCTGGAAATGCTGAACCGCCTAATCCAGAATTTTCTCGCGATGTGCATAGTGCAATCTTATCTGCTCCATCAGGAGTAACCTCTGTGTCAATTAAACCAAGTGGTGGATCTGGTGTTACGGATTCTTTTGCCAATTCCAGTACCCAAAAGAGTGTAGCTCCCAGTTCTTCATTAACACCCGGTGATGCTTTCTCTTCTGCACAACTAAAAGGGTCTGAAATAGCTGAAGTATCTTCCCAGCAGTCTAAGTTATCCACTGATTCACCAGTTTTGAGCTCATTTCCAAATCTATCTTCTGCAAAGCCTGCATCAGCTTCCTTGTTGCTTTCTACATCTGGTGTCTCTGAAGATTCTGTTTCAGTTATACCTAATAATGAGGGCAGAAAGAAGGAATCTGTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGATGATACAGAAGAAAGGGCAATCACAGCATCAGGTTCCTGTGCAATCGGTTCCCATGGTTAATGTGCCTTCCCAAGCTGTTACTGGTGGTATACCTGATGAGGTTTCTGAAACTGTGGGAACTGGGACAAATGATTCTGCAGTAATTACGAGTGAAAATCTCTCAACTGCAGCTTCAGACTTGTTATCGGCTACTAGTGGCAGCATGCCTTACGCTGTTGAAATGAAAACTAATGATTCTACACAAGTGTCAACTCATGCTTCAGCCGAAGGATCTTCCATGGTGGTGGATGATTTTAACAATCTTAAGAGTGCTGAGCTAGATGAACTGTCTCAACAGGATAAAGTATTGCAGTCAAATATCATGGAAGTAGTGGCTAAAACAGAAAACTTGTCTCTTGAAGGATGTAAACAAGATGTCAGTGTTGGTGGAACAGAATTAAAACAAACTAAACAGGGTGACGTAAAGCTAAACACTGAGGCTGTAGCCTTGAGATCTGCGCATCCAGGACAGGATGGATCTACAAGTTGTAGTGCAGGATATGATGGGACGGCTGATAATACTGCTTTGGATAGGAAAGATGTTTCCTTGATCAGAAATGACAGTGTAATTAGTAATGATGCTGTTTCTACAAATTCTAGCATATCAGATCAGCAGTCTGCTGATAACATAGAAACATCTTCAAAACATTTGAAGGATGGTTCAGACAGTACTGGCAGTGGTGCAGTGTCTCTTCCAGCATCAGTTATCAAGGACAAACTGGTTTCAGAGCCTAGTAAGGTGAAACCTACATCAAAGGGTAAGAAGAAAAGAAAAGAAATTCTTCTGAAGGCTGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAATCTATGATAAGTGCAGAGAAAACTGAAAGTGATTCTGCTTCTGGAAATTTAGAGCAGTTGCCTACTGAGGTTGCACAGTCAGATGATGTAGCAAACAAGCAATCTAAGCAGAGTAAAGCTGAACTGGATGATTGGGAGGATGCTGCTGACATGTCTACGCCAAAACTTGAAGTTTTAGATGAAACTGAACATGTTAGTGAAGGAACTGCAGTTACTGGCAAAAAGTACTCTAGAGATTTCCTTTTGAAATTTTCAGAGCAATGCATGGACCTTCCTGAAGGATTTGAAATCACGGCTGACATAGCTGAGGTTCTGATGAATCCTAATTTTAGTTCTCATGTAACTGAACGTGATTCACCTTCTACTGGAAGAATTATTGATAGGTCAGGCAGCATGTCTCGTCGTGGGAGTGGTATTATTGAGGAAGACAAATGGAGTAAAGGTTCCAATGCATATCATTCTGGTATGCGTTTGGATGGTGTTGGTGGTAATGCAGGGTTTCGTACTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAGACACCTGTGCAATATGCTGGAGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGGTGGCAACGTGCTACAAACTTCCAGCAGAGGGGTTTGATTCCATCTCCACAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTGACTGATGAGGAAGAGGCGAAGCAGAGGCAGTTGAAGGGCATATTAAACAAATTAACTCCTCAGAATTTTGAGAAGCTTTTTGATCAGGTCAGAGCAGTTAATATTGACAATGTTGTCACTCTCAATGGTGTCATCTCACAAATATTTGAAAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCTGCTGCATTGCCGGATCTCAGTCAAGACAATGAAAAGATAACTTTTAAGAGACTATTGTTAAACAAGTGCCAAGAAGAATTTGAAAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAAGGTGAGGTCAAGCTGTCTAATGAGGAAAGAGAAGAAAAACGAACCAAGGCAAGGAGACGCATGTTGGGTAATATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATTCATGCATCAAGAAGCTATTGGGTCAATATCAGGATCCAGATGAAGAAGATATTGAAGCTTTGTGCAAATTGATGAGTACGATTGGGGAGATGATTGACCATCCCAAAGCCAAAGAACATATGGATGTATATTTTGACATGATGAGATCACTGTCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGCTGAAGGATGTAATTGATTTGAGAAAGAATAAATGGCAACAAAGAAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTTCACAGAGATGCTTCTCAAGAGAGATTGGCCCAAGCTGGTAGGTTGGGTCGTGGTCCAGGCAACAATCCACCTAGAAGAATGCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGTCTTCGTGGATTGCCTTCTCCAGCACGTGGTTATGGTTCCCAGGATGCTCGTATTGATGAACGGCAAACTTATGAGGCTAGGACATTATCAGTTCCCTTACCACAAAGACCTTTAGGTGATGAATCAATAACGTTGGGACCAATGGGTGGTCTTGCCAGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAATGGTTATAATAATTTGTCAGAGCGCACTTCATACAGCTCTAGGGATGATCCCGCATCAAGATATACTCCAGATAGATTTTCTGGTTCTACTTACGATCAACCTAGTGCTCAAGATCATAATGTGAATTATGCGAACAGGGACATGAGAAATGCGAATAGGATTCCTGAAAAACCTGTTGTAACTTCGCCACCTGCCAGAACACAAGGGACAGCAGTCTCCCAAAATATTAGCCCAGATCGATTACAGGACATGTCCATGTTAGCAATCAGAGAATACTACAGTGCGAGAGATGTGAATGAAGTTGTTCTATGTATCAAAGATCTGAACTCTCCAAGCTTTCATGCTTCCATGGTTTCTCTTTGGGTGACAGACTCTTTCGAGAGAAAGGACACCGAGAGAGATCTTTTGGCCCAGCTGCTTGTGAAGCTTGTGAAATCTCAGGATGGACCCTTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACTTTGGAAGATGCGGTTAATGATGCCCCCAAAGCACCGGAGTTTCTTGGCCGTGTATTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAACGAGATTGGGCAGTTAATACATGAGGGTGGAGAGGAACCGGGGAGCCTATTAGAAGCTGGGCTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAGGGTGATGCTGTTTTGAGTGATATCTGTGCCAGTTCCAACTTGCGGTTGGAGACCTTCCGGCCGCCGGAACCTCTTACATCAAGGAAGTTAGAAAAATTTATTTAG 5472 0.4393 MSFNQSKSEKSDAVYRKSGRSASFNQQRGSSGGAYGRGGGGGGGAGPSPSLSSNRSFNKKSNNNAQGGQSRVNPALVNSAESNSSYAARTVPNGSHVQPQIHGVSDAPVTNATAKPFESSAVQRSTRAVPKAPTSQPPSMSSDPAAPTTPAKADASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHDSFRPAPSVPTPPVPKQQAAKKDTGVTDQSNTGETHTGTRAKKDTQVSQLPPASQMQKPSVIPLTGISMPMPYHQSQASVHFGGPNPQIQSQGMSSAPLQMPLPMPLPIGSATQVQQPVFVPNLQPHPIHPQGIMHQGQNMGFTPQIGPQLSHQLGNMGIGIGPQYPPQQGGKFAGPRKTTPVKITHPETHEELRLDKRADAYSDGGSSGVRPHSGMASQSQPAQQFAASHPISYYPSSSYGTNSLFYPTASSLPLTSSQITPNSQPSRFNYAVSHGPQNVSFVNSSSHSSLPVNKAGTPIAGNAEPPNPEFSRDVHSAILSAPSGVTSVSIKPSGGSGVTDSFANSSTQKSVAPSSSLTPGDAFSSAQLKGSEIAEVSSQQSKLSTDSPVLSSFPNLSSAKPASASLLLSTSGVSEDSVSVIPNNEGRKKESVSRSNSLKDNQKMIQKKGQSQHQVPVQSVPMVNVPSQAVTGGIPDEVSETVGTGTNDSAVITSENLSTAASDLLSATSGSMPYAVEMKTNDSTQVSTHASAEGSSMVVDDFNNLKSAELDELSQQDKVLQSNIMEVVAKTENLSLEGCKQDVSVGGTELKQTKQGDVKLNTEAVALRSAHPGQDGSTSCSAGYDGTADNTALDRKDVSLIRNDSVISNDAVSTNSSISDQQSADNIETSSKHLKDGSDSTGSGAVSLPASVIKDKLVSEPSKVKPTSKGKKKRKEILLKADAAGSTSDLYNAYKGPEEKKESMISAEKTESDSASGNLEQLPTEVAQSDDVANKQSKQSKAELDDWEDAADMSTPKLEVLDETEHVSEGTAVTGKKYSRDFLLKFSEQCMDLPEGFEITADIAEVLMNPNFSSHVTERDSPSTGRIIDRSGSMSRRGSGIIEEDKWSKGSNAYHSGMRLDGVGGNAGFRTGQGGNFGVLRNPRTQTPVQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRATNFQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFDQVRAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHSCIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFDMMRSLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERLAQAGRLGRGPGNNPPRRMPMDFGPRGSSMLSPNAQMGGLRGLPSPARGYGSQDARIDERQTYEARTLSVPLPQRPLGDESITLGPMGGLARGMSIRGPPAVSSSTGLNGYNNLSERTSYSSRDDPASRYTPDRFSGSTYDQPSAQDHNVNYANRDMRNANRIPEKPVVTSPPARTQGTAVSQNISPDRLQDMSMLAIREYYSARDVNEVVLCIKDLNSPSFHASMVSLWVTDSFERKDTERDLLAQLLVKLVKSQDGPLGQAQLIKGFESVLSTLEDAVNDAPKAPEFLGRVFAKAITEHVVSLNEIGQLIHEGGEEPGSLLEAGLAADVLGSTLEVIKMEKGDAVLSDICASSNLRLETFRPPEPLTSRKLEKFI 1823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01926 1823 MobiDBLite consensus disorder prediction 1448 1513 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 850 987 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 933 947 - -
Viun5g01926 1823 SMART if4_15 1200 1422 IPR003890 GO:0003723|GO:0005515
Viun5g01926 1823 MobiDBLite consensus disorder prediction 528 562 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 1 255 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 1291 1318 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 398 422 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 1545 1602 - -
Viun5g01926 1823 Coils Coil 1282 1302 - -
Viun5g01926 1823 SUPERFAMILY ARM repeat 1630 1820 IPR016024 -
Viun5g01926 1823 Pfam MA3 domain 1641 1748 IPR003891 -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 47 146 - -
Viun5g01926 1823 FunFam Eukaryotic translation initiation factor 4G 1629 1822 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 636 655 - -
Viun5g01926 1823 ProSiteProfiles MI domain profile. 1635 1759 IPR003891 -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 613 655 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 481 511 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 18 32 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 850 867 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 1541 1628 - -
Viun5g01926 1823 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 351 1823 IPR045208 GO:0003743
Viun5g01926 1823 SMART ma3_7 1636 1750 IPR003891 -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 1053 1077 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 948 974 - -
Viun5g01926 1823 SUPERFAMILY ARM repeat 1194 1424 IPR016024 -
Viun5g01926 1823 Gene3D - 1627 1823 - -
Viun5g01926 1823 Gene3D - 1200 1435 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 1053 1069 - -
Viun5g01926 1823 Pfam MIF4G domain 1200 1422 IPR003890 GO:0003723|GO:0005515
Viun5g01926 1823 FunFam Eukaryotic translation initiation factor 4G 1200 1435 - -
Viun5g01926 1823 MobiDBLite consensus disorder prediction 219 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01926 Viun-Chr5 19607704 19616722 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01926 1 1822 Eukaryotic Initiation Factors Gene Family AT3G60240 45.011 0.0 1281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01926 K03260 - gmx:100796636 2852