Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01925 ATGTCCTTCAATCAATCAAAGTCCGAGAAGAGCGACGCTGTGTACCGAAAATCCGGGCGATCCGCCAGCTTCAATCAGCAGCGAGGCTCCTCCGGCGGTGCGTACGGCAGGGGCGGAGGCGGCGGTGGCGGCGCTGGGCCTTCTCCGTCGCTCTCCTCTAACCGGAGTTTTAACAAGAAGTCTAATAACAATGCACAAGGTGGGCAATCTAGGGTAAACCCTGCACTGGTGAATTCGGCTGAGTCTAATAGCAGTTATGCAGCCCGGACTGTACCAAACGGTTCCCACGTACAGCCACAGATTCATGGAGTATCTGATGCGCCAGTTACAAATGCAACTGCCAAGCCATTTGAATCGTCAGCTGTGCAAAGGAGCACCAGAGCTGTTCCAAAAGCTCCTACCTCTCAACCTCCCTCCATGAGTTCTGATCCAGCAGCTCCTACAACTCCTGCAAAGGATGCATCTAAGGCATTTCCTTTCCAATTTGGATCCATCAGTCCTGGCTTTATGAATGGGATGGCTATTCCTGCTCGCACAAGCTCAGCTCCTCCTAATATAGACGAGCAGAAGCGGGATCAGGCACGACATGATTCTTTTAGACCTGCACCCTCAGTGCCAACACCTCCTGTTCCAAAGCAGCAGGCAGCGAAGAAGGATACAGGTGTTACTGACCAATCTAATACTGGGGAGACTCATACTGGGACTAGGGCAAAAAAGGATACTCAAGTGTCACAATTACCCCCAGCAAGCCAGATGCAGAAGCCTTCTGTCATTCCTTTAACTGGAATTTCAATGCCAATGCCATACCACCAGTCACAGGCATCTGTACACTTTGGTGGTCCTAATCCACAGATTCAATCTCAAGGTATGTCATCAGCACCTCTTCAGATGCCCTTGCCAATGCCATTGCCGATTGGAAGTGCCACACAAGTGCAACAACCGGTTTTTGTTCCAAACCTTCAACCTCATCCTATCCATCCTCAAGGAATCATGCATCAAGGCCAAAACATGGGTTTCACTCCTCAAATTGGCCCTCAGTTGTCCCATCAGTTAGGCAACATGGGTATTGGAATTGGCCCACAATATCCACCACAGCAAGGAGGAAAGTTTGCTGGTCCTCGTAAAACTACTCCTGTCAAGATAACCCATCCCGAGACACATGAAGAGCTAAGACTTGATAAAAGGGCAGATGCATATTCAGATGGTGGGTCATCTGGTGTGAGGCCTCATTCTGGTATGGCTTCTCAATCTCAGCCTGCCCAGCAATTTGCAGCTTCTCATCCTATTAGTTACTATCCATCAAGCTCATATGGTACCAATTCTCTCTTTTATCCAACTGCTAGTTCTCTTCCATTAACAAGTAGCCAGATAACACCTAATTCCCAGCCATCCAGATTTAATTATGCTGTGAGCCATGGTCCGCAGAATGTTAGTTTTGTAAATTCATCATCTCATAGTTCTCTGCCTGTTAATAAAGCTGGCACTCCTATTGCTGGAAATGCTGAACCGCCTAATCCAGAATTTTCTCGCGATGTGCATAGTGCAATCTTATCTGCTCCATCAGGAGTAACCTCTGTGTCAATTAAACCAAGTGGTGGATCTGGTGTTACGGATTCTTTTGCCAATTCCAGTACCCAAAAGAGTGTAGCTCCCAGTTCTTCATTAACACCCGGTGATGCTTTCTCTTCTGCACAACTAAAAGGGTCTGAAATAGCTGAAGTATCTTCCCAGCAGTCTAAGTTATCCACTGATTCACCAGTTTTGAGCTCATTTCCAAATCTATCTTCTGCAAAGCCTGCATCAGCTTCCTTGTTGCTTTCTACATCTGGTGTCTCTGAAGATTCTGTTTCAGTTATACCTAATAATGAGGGCAGAAAGAAGGAATCTGTTAGTAGGTCAAATTCTTTGAAGGATAATCAGAAGATGATACAGAAGAAAGGGCAATCACAGCATCAGGTTCCTGTGCAATCGGTTCCCATGGTTAATGTGCCTTCCCAAGCTGTTACTGGTGGTATACCTGATGAGGTTTCTGAAACTGTGGGAACTGGGACAAATGATTCTGCAGTAATTACGAGTGAAAATCTCTCAACTGCAGCTTCAGACTTGTTATCGGCTACTAGTGGCAGCATGCCTTACGCTGTTGAAATGAAAACTAATGATTCTACACAAGTGTCAACTCATGCTTCAGCCGAAGGATCTTCCATGGTGGTGGATGATTTTAACAATCTTAAGAGTGCTGAGCTAGATGAACTGTCTCAACAGGATAAAGTATTGCAGTCAAATATCATGGAAGTAGTGGCTAAAACAGAAAACTTGTCTCTTGAAGGATGTAAACAAGATGTCAGTGTTGGTGGAACAGAATTAAAACAAACTAAACAGGGTGACGTAAAGCTAAACACTGAGGCTGTAGCCTTGAGATCTGCGCATCCAGGACAGGATGGATCTACAAGTTGTAGTGCAGGATATGATGGGACGGCTGATAATACTGCTTTGGATAGGAAAGATGTTTCCTTGATCAGAAATGACAGTGTAATTAGTAATGATGCTGTTTCTACAAATTCTAGCATATCAGATCAGCAGTCTGCTGATAACATAGAAACATCTTCAAAACATTTGAAGGATGGTTCAGACAGTACTGGCAGTGGTGCAGTGTCTCTTCCAGCATCAGTTATCAAGGACAAACTGGTTTCAGAGCCTAGTAAGGTGAAACCTACATCAAAGGGTAAGAAGAAAAGAAAAGAAATTCTTCTGAAGGCTGATGCTGCTGGGTCAACATCTGATCTTTATAATGCATACAAGGGACCTGAGGAAAAGAAAGAATCTATGATAAGTGCAGAGAAAACTGAAAGTGATTCTGCTTCTGGAAATTTAGAGCAGTTGCCTACTGAGGTTGCACAGTCAGATGATGTAGCAAACAAGCAATCTAAGCAGAGTAAAGCTGAACTGGATGATTGGGAGGATGCTGCTGACATGTCTACGCCAAAACTTGAAGTTTTAGATGAAACTGAACATGTTAGTGAAGGAACTGCAGTTACTGGCAAAAAGTACTCTAGAGATTTCCTTTTGAAATTTTCAGAGCAATGCATGGACCTTCCTGAAGGATTTGAAATCACGGCTGACATAGCTGAGGTTCTGATGAATCCTAATTTTAGTTCTCATGTAACTGAACGTGATTCACCTTCTACTGGAAGAATTATTGATAGGTCAGGCAGCATGTCTCGTCGTGGGAGTGGTATTATTGAGGAAGACAAATGGAGTAAAGGTTCCAATGCATATCATTCTGGTATGCGTTTGGATGGTGTTGGTGGTAATGCAGGGTTTCGTACTGGCCAAGGAGGCAATTTTGGTGTTTTAAGGAATCCACGCACACAGACACCTGTGCAATATGCTGGAGGGATTCTTTCTGGTCCAATGCAATCCATGGTAAATCAGGGAGGAATGCAAAGAAATAGCCCTGATGGAGAAAGGTGGCAACGTGCTACAAACTTCCAGCAGAGGGGTTTGATTCCATCTCCACAAACTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAGGTGGGTAAAGTGACTGATGAGGAAGAGGCGAAGCAGAGGCAGTTGAAGGGCATATTAAACAAATTAACTCCTCAGAATTTTGAGAAGCTTTTTGATCAGGTCAGAGCAGTTAATATTGACAATGTTGTCACTCTCAATGGTGTCATCTCACAAATATTTGAAAAGGCCTTGATGGAGCCTACCTTCTGTGAAATGTATGCCAATTTCTGTTTTCATCTGGCTGCTGCATTGCCGGATCTCAGTCAAGACAATGAAAAGATAACTTTTAAGAGACTATTGTTAAACAAGTGCCAAGAAGAATTTGAAAGGGGTGAAAGAGAGCAAGAAGAAGCTAATAAGGCTGATGAAGGTGAGGTCAAGCTGTCTAATGAGGAAAGAGAAGAAAAACGAACCAAGGCAAGGAGACGCATGTTGGGTAATATTAGATTGATTGGAGAACTATATAAGAAGAAAATGTTGACAGAGAGGATAATGCATTCATGCATCAAGAAGCTATTGGGTCAATATCAGGATCCAGATGAAGAAGATATTGAAGCTTTGTGCAAATTGATGAGTACGATTGGGGAGATGATTGACCATCCCAAAGCCAAAGAACATATGGATGTATATTTTGACATGATGAGATCACTGTCAAACAACATGAATTTATCTTCTAGGGTGAGGTTCATGCTGAAGGATGTAATTGATTTGAGAAAGAATAAATGGCAACAAAGAAGAAAAGTTGAAGGTCCAAAGAAGATTGAGGAGGTTCACAGAGATGCTTCTCAAGAGAGATTGGCCCAAGCTGGTAGGTTGGGTCGTGGTCCAGGCAACAATCCACCTAGAAGAATGCCTATGGATTTTGGTCCAAGAGGGTCATCTATGTTATCTCCTAATGCTCAGATGGGTGGTCTTCGTGGATTGCCTTCTCCAGCACGTGGTTATGGTTCCCAGGATGCTCGTATTGATGAACGGCAAACTTATGAGGCTAGGACATTATCAGTTCCCTTACCACAAAGACCTTTAGGTGATGAATCAATAACGTTGGGACCAATGGGTGGTCTTGCCAGAGGAATGTCCATTAGAGGTCCACCTGCAGTTTCAAGTTCAACTGGTCTTAATGGTTATAATAATTTGTCAGAGCGCACTTCATACAGCTCTAGGGATGATCCCGCATCAAGATATACTCCAGATAGATTTTCTGGTTCTACTTACGATCAACCTAGTGCTCAAGATCATAATGTGAATTATGCGAACAGGGACATGAGAAATGCGAATAGGATTCCTGAAAAACCTGTTGTAACTTCGCCACCTGCCAGAACACAAGGGACAGCAGTCTCCCAAAATATTAGCCCAGATCGATTACAGGACATGTCCATGTTAGCAATCAGAGAATACTACAGTGCGAGAGATGTGAATGAAGTTGTTCTATGTATCAAAGATCTGAACTCTCCAAGCTTTCATGCTTCCATGGTTTCTCTTTGGGTGACAGACTCTTTCGAGAGAAAGGACACCGAGAGAGATCTTTTGGCCCAGCTGCTTGTGAAGCTTGTGAAATCTCAGGATGGACCCTTGGGTCAAGCCCAGCTCATCAAAGGGTTTGAATCTGTTCTTAGTACTTTGGAAGATGCGGTTAATGATGCCCCCAAAGCACCGGAGTTTCTTGGCCGTGTATTTGCCAAAGCTATAACAGAGCATGTAGTCTCTTTGAACGAGATTGGGCAGTTAATACATGAGGGTGGAGAGGAACCGGGGAGCCTATTAGAAGCTGGGCTTGCAGCTGATGTTCTTGGAAGCACCTTGGAGGTAATAAAAATGGAGAAGGGTGATGCTGTTTTGAGTGATATCTGTGCCAGTTCCAACTTGCGGTTGGAGACCTTCCGGCCGCCGGAACCTCTTACATCAAGGAAGTTAGAAAAATTTATTTAG 5469 0.4392 MSFNQSKSEKSDAVYRKSGRSASFNQQRGSSGGAYGRGGGGGGGAGPSPSLSSNRSFNKKSNNNAQGGQSRVNPALVNSAESNSSYAARTVPNGSHVQPQIHGVSDAPVTNATAKPFESSAVQRSTRAVPKAPTSQPPSMSSDPAAPTTPAKDASKAFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKRDQARHDSFRPAPSVPTPPVPKQQAAKKDTGVTDQSNTGETHTGTRAKKDTQVSQLPPASQMQKPSVIPLTGISMPMPYHQSQASVHFGGPNPQIQSQGMSSAPLQMPLPMPLPIGSATQVQQPVFVPNLQPHPIHPQGIMHQGQNMGFTPQIGPQLSHQLGNMGIGIGPQYPPQQGGKFAGPRKTTPVKITHPETHEELRLDKRADAYSDGGSSGVRPHSGMASQSQPAQQFAASHPISYYPSSSYGTNSLFYPTASSLPLTSSQITPNSQPSRFNYAVSHGPQNVSFVNSSSHSSLPVNKAGTPIAGNAEPPNPEFSRDVHSAILSAPSGVTSVSIKPSGGSGVTDSFANSSTQKSVAPSSSLTPGDAFSSAQLKGSEIAEVSSQQSKLSTDSPVLSSFPNLSSAKPASASLLLSTSGVSEDSVSVIPNNEGRKKESVSRSNSLKDNQKMIQKKGQSQHQVPVQSVPMVNVPSQAVTGGIPDEVSETVGTGTNDSAVITSENLSTAASDLLSATSGSMPYAVEMKTNDSTQVSTHASAEGSSMVVDDFNNLKSAELDELSQQDKVLQSNIMEVVAKTENLSLEGCKQDVSVGGTELKQTKQGDVKLNTEAVALRSAHPGQDGSTSCSAGYDGTADNTALDRKDVSLIRNDSVISNDAVSTNSSISDQQSADNIETSSKHLKDGSDSTGSGAVSLPASVIKDKLVSEPSKVKPTSKGKKKRKEILLKADAAGSTSDLYNAYKGPEEKKESMISAEKTESDSASGNLEQLPTEVAQSDDVANKQSKQSKAELDDWEDAADMSTPKLEVLDETEHVSEGTAVTGKKYSRDFLLKFSEQCMDLPEGFEITADIAEVLMNPNFSSHVTERDSPSTGRIIDRSGSMSRRGSGIIEEDKWSKGSNAYHSGMRLDGVGGNAGFRTGQGGNFGVLRNPRTQTPVQYAGGILSGPMQSMVNQGGMQRNSPDGERWQRATNFQQRGLIPSPQTPLQMMHKAEKKYEVGKVTDEEEAKQRQLKGILNKLTPQNFEKLFDQVRAVNIDNVVTLNGVISQIFEKALMEPTFCEMYANFCFHLAAALPDLSQDNEKITFKRLLLNKCQEEFERGEREQEEANKADEGEVKLSNEEREEKRTKARRRMLGNIRLIGELYKKKMLTERIMHSCIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKEHMDVYFDMMRSLSNNMNLSSRVRFMLKDVIDLRKNKWQQRRKVEGPKKIEEVHRDASQERLAQAGRLGRGPGNNPPRRMPMDFGPRGSSMLSPNAQMGGLRGLPSPARGYGSQDARIDERQTYEARTLSVPLPQRPLGDESITLGPMGGLARGMSIRGPPAVSSSTGLNGYNNLSERTSYSSRDDPASRYTPDRFSGSTYDQPSAQDHNVNYANRDMRNANRIPEKPVVTSPPARTQGTAVSQNISPDRLQDMSMLAIREYYSARDVNEVVLCIKDLNSPSFHASMVSLWVTDSFERKDTERDLLAQLLVKLVKSQDGPLGQAQLIKGFESVLSTLEDAVNDAPKAPEFLGRVFAKAITEHVVSLNEIGQLIHEGGEEPGSLLEAGLAADVLGSTLEVIKMEKGDAVLSDICASSNLRLETFRPPEPLTSRKLEKFI 1822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01925 1822 MobiDBLite consensus disorder prediction 47 148 - -
Viun5g01925 1822 Gene3D - 1626 1822 - -
Viun5g01925 1822 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 350 1822 IPR045208 GO:0003743
Viun5g01925 1822 Pfam MA3 domain 1640 1747 IPR003891 -
Viun5g01925 1822 SUPERFAMILY ARM repeat 1193 1423 IPR016024 -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 1052 1076 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 218 254 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 397 421 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 635 654 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 612 654 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 480 510 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 932 946 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 1540 1626 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 1447 1512 - -
Viun5g01925 1822 SMART if4_15 1199 1421 IPR003890 GO:0003723|GO:0005515
Viun5g01925 1822 MobiDBLite consensus disorder prediction 947 973 - -
Viun5g01925 1822 SUPERFAMILY ARM repeat 1629 1819 IPR016024 -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 1 254 - -
Viun5g01925 1822 FunFam Eukaryotic translation initiation factor 4G 1199 1434 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 18 32 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 849 986 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 1544 1601 - -
Viun5g01925 1822 Coils Coil 1281 1301 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 1052 1068 - -
Viun5g01925 1822 FunFam Eukaryotic translation initiation factor 4G 1628 1821 - -
Viun5g01925 1822 ProSiteProfiles MI domain profile. 1634 1758 IPR003891 -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 849 866 - -
Viun5g01925 1822 Gene3D - 1199 1434 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 527 561 - -
Viun5g01925 1822 MobiDBLite consensus disorder prediction 1290 1317 - -
Viun5g01925 1822 SMART ma3_7 1635 1749 IPR003891 -
Viun5g01925 1822 Pfam MIF4G domain 1199 1421 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01925 Viun-Chr5 19607704 19616722 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01925 1 1821 Eukaryotic Initiation Factors Gene Family AT3G60240 45.011 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01925 K03260 - gmx:100796636 2852.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01925 5 19607704 19616722 Viun5g01925 5 19607704 19616722 ECH
Viun10g00241 10 1787639 1798016 Viun5g01925 5 19607704 19616722 PCT