Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01875 ATGGATTTTGTGGTGGTGGATTTGGACAAGGCAAATGAAGCTGAGCGTAGCTGTCTAGAAGAGAGTACAAGTATATTTGAAGGAGTTGAAATCCAAGAGCCTTATGTGGGCATGGAATTTGATTCTGAAGTAGCTGCTAGAAAATTTTATGTTGATTATGCCAGACGGGTAGGATTTGTTGTACGCATAATGCAAAGGCGACGTTCTGGAATTGATGGGAGGACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGATTCTCACCAAATACCAAGGGAGCACTGGGACCAGAGAAAAAGCCAAGACCTAGTGCCCGTGAAGGTTGCAAGGCAACTATCTTGGTAAAGTTAGAAAAATCTGGAAAATGGGTTGTCACCAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGATTTGGCACAGTGGGTGATAAAGATAAGAAAATTTCAGAACTTACAATGGAGTTGGAACGCCAAGATCAACTTTGTGCTTCATACCGAGAAAAACTGCTCAGCTTCATAAACAATGTTGAGGAGGAGACACATGAACTGTCCACAAAAGTTCAACTCGTTGTCGAAAATGTAAGGAGAGCTGAATCAGAATTGAAAAAATGTTCACTGAACATAAAGCCTTGGTGCTTAACCTGA 660 0.4121 MDFVVVDLDKANEAERSCLEESTSIFEGVEIQEPYVGMEFDSEVAARKFYVDYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNTKGALGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFGTVGDKDKKISELTMELERQDQLCASYREKLLSFINNVEEETHELSTKVQLVVENVRRAESELKKCSLNIKPWCLT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01875 219 MobiDBLite consensus disorder prediction 85 106 - -
Viun5g01875 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 200 - -
Viun5g01875 219 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Viun5g01875 219 Coils Coil 153 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01875 Viun-Chr5 17831314 17835994 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun5g01875 FAR1 1.4e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01875 - - vun:114183030 439.884