Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01874 ATGAAGTTGATGTTTAGGGTTTTGGCAAATGAAGCTGAGCGTAGCTGTCTAGAAGAGAGTACAAGTATATTTGAAGGAGTTGAAATCCAAGAGCCTTATGTGGGCATGGAATTTGATTCTGAAGTAGCTGCTAGAAAATTTTATGTTGATTATGCCAGACGGGTAGGATTTGTTGTACGCATAATGCAAAGGCGACGTTCTGGAATTGATGGGAGGACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGATTCTCACCAAATACCAAGGGAGCACTGGGACCAGAGAAAAAGCCAAGACCTAGTGCCCGTGAAGGTTGCAAGGCAACTATCTTGGTAAAGTTAGAAAAATCTGGAAAATGGGTTGTCACCAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGATTTGGCACAGTGGGTGATAAAGATAAGAAAATTTCAGAACTTACAATGGAGTTGGAACGCCAAGATCAACTTTGTGCTTCATACCGAGAAAAACTGCTCAGCTTCATAAACAATGTTGAGGAGGAGACACATGAACTGTCCACAAAAGTTCAACTCGTTGTCGAAAATGTAAGGAGAGCTGAATCAGAATTGAAAAAATGTTCACTGAACATAAAGCCTTGGTGCTTAACCTGA 654 0.4083 MKLMFRVLANEAERSCLEESTSIFEGVEIQEPYVGMEFDSEVAARKFYVDYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNTKGALGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFGTVGDKDKKISELTMELERQDQLCASYREKLLSFINNVEEETHELSTKVQLVVENVRRAESELKKCSLNIKPWCLT 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01874 217 MobiDBLite consensus disorder prediction 83 104 - -
Viun5g01874 217 Coils Coil 151 171 - -
Viun5g01874 217 Pfam FAR1 DNA-binding domain 46 135 IPR004330 -
Viun5g01874 217 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01874 Viun-Chr5 17831313 17835994 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun5g01874 FAR1 1.3e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01874 - - vun:114183030 426.402