Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01872 ATGACTACGGAGTTTGTGGATTTGACTTTTATGGATTTTGTGGTGGTGGATTTGGACAAGGCAAATGAAGCTGAGCGTAGCTGTCTAGAAGAGAGTACAAGTATATTTGAAGGAGTTGAAATCCAAGAGCCTTATGTGGGCATGGAATTTGATTCTGAAGTAGCTGCTAGAAAATTTTATGTTGATTATGCCAGACGGGTAGGATTTGTTGTACGCATAATGCAAAGGCGACGTTCTGGAATTGATGGGAGGACTCTTGCTCGTCGACTTGGATGTAACAAACAAGGATTCTCACCAAATACCAAGGGAGCACTGGGACCAGAGAAAAAGCCAAGACCTAGTGCCCGTGAAGGTTGCAAGGCAACTATCTTGGTAAAGTTAGAAAAATCTGGAAAATGGGTTGTCACCAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGATTTGGCACAGTGGGTGATAAAGATAAGAAAATTTCAGAACTTACAATGGAGTTGGAACGCCAAGATCAACTTTGTGCTTCATACCGAGAAAAACTGCTCAGCTTCATAAACAATGTTGAGGAGGAGACACATGAACTGTCCACAAAAGTTCAACTCGTTGTCGAAAATGTAAGGAGAGCTGAATCAGAATTGAAAAAATGTTCACTGAACATAAAGCCTTGGTGCTTAACCTGA 690 0.4101 MTTEFVDLTFMDFVVVDLDKANEAERSCLEESTSIFEGVEIQEPYVGMEFDSEVAARKFYVDYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNTKGALGPEKKPRPSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFGTVGDKDKKISELTMELERQDQLCASYREKLLSFINNVEEETHELSTKVQLVVENVRRAESELKKCSLNIKPWCLT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01872 229 Pfam FAR1 DNA-binding domain 58 147 IPR004330 -
Viun5g01872 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 210 - -
Viun5g01872 229 Coils Coil 163 183 - -
Viun5g01872 229 MobiDBLite consensus disorder prediction 97 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01872 Viun-Chr5 17831308 17835994 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun5g01872 FAR1 1.5e-28 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01872 - - vun:114183030 446.047