Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01865 ATGGAACAAACACAAACACTGGGTCTGGACAGCATTGATCTCCTGGACGATGTTATCCCTCAAAACAATTGTAACAGCATTGGATCTGTTTCAACCAACAACAACTCTGGTGAAAGTAGCTTGGGTTTGGTTCCTAAAGTGGGGATGACTTTCGAAACTGTGGATGAGCTGAAGAAAGTTTATAAACAACATGCAATCAGAAGTGGTTTCGGTGTCCGAATAAGAACTTCAAAGAAAGATGATGATAATCAGCTCTACTACGTCAAACTAGTTTGTTCTCGAGAAGGAACCCATGTGTCCAACATTCCCCCGGAAAAAAGAACCATTCCAACACAAAGAAAGGCATGCCCTGCACGTGTTACTGCTGTTAAAAAAGATGGTCAATGGGGGATTATAAGTGTGGTGGAGGAACATAATCACCATTTAAGTCCACAGAAATCAAGGCTTGTGCGAGGCAATAGGAGGATAAATATGCAAGCAAAAAGAGTTATTGATATCAATGATCAAGCGGGAGTACGTTTGAACAAAAGTTTTCGGTCCTTGGTCTTTGAGGCAGGAGGTTATGACAACTTGAATTTTGTGGAAAGGGATGTCAGGAACTATATTGGTCAACAGAGACGAGCACTTGTTAAGGATGGCGATGGGCAAGCATTGTTTAATCATTTTTCGAGAATGAGGGAATTAAATAGGGATTTCTTCTTTGAAATCGACGTCGATCACGACAACAGAATTACTAATGTGTTTTGGGCGGACGGGAGGAGTCGAGCAGCATGTGTGGATTTTGGGGATATTGTGTCATTCGACACCACATACTTGACTAATAAGTATGACATGCCTTTTGCCCCATTTGTAGGTGTTAATCATCACGGTCAATCCATTTTATTAGGTTGTGGGCTGTTATCATCAGAGGACACTAGAACATTTGTGTGGTTATTTACATGCTGGTTGCGTTGCATGTCAAATAAGGAACCACTTGGAATCGTCACCGACCAATGCAAGGTGGTGTCTTTGGCATATCATGAAAAAGTTCCTGAGAAGTTGCAAGGGTACTCAAGGTACAAGCAAATTAAGCACGACATGAAACAGTTGGTGTATGAGTCACTCAATGTTGATGCTTTTGAGAGTGGTTGGGATAAGTTCCTAACCGATAATGGATTACAAGAAAATGAATGGCTTTTAACACTTTATGAAGATAGACATCGTTGGGTGCCATGTTATTTGAAGAATAACTTTTGGGCAGGTATGTCAACCACGCAACGGAGTGAGGGCATGAACGCATTCTTCGATGGTTTCATCAATTCCACAACAACATTGCAACAATTCGTGGTTCAATATGACAATGCCATTAGGCAAAAGGCCGAAAAGGAGTGTGAGGCAGACTTTGCATCCTTGAATACGACAATTCCTTGTGGCTCACATTCCACTATTGAGAGACAATTCCAGGCTGAATACACTCATGCTAAGTTTGCAGAGGTTCAACACAAATTTAGGTGTAAAATGAATTGCATGATTAAAAATGTATATGTCGAAGCGGGAACCTCAAATTACCGTGTTATGGAAGAATTTATGTGGAAAGGTCAATGCGCAGACAAGTACCATGATGTTTTGTTTCATCATCACACACTTGACATACAGTGCACTTGCCTTTTGTTTGAGTTTAGAGGAATACTTTGTAGGCACTGCTTAGTCATGTATGCGCAAGAGGGCGTTAAAAGTGTGCCCGATAAATATGTTTTAAAGAGATGGAGCAAGCTACAACGTAGAAGGCACACATACATAAGGGTTGGAAGCAATTCTCATAAGGAAGAAGCTAATGTCAAAAGGTATGACGCACTTTGTAAGCGTTTCTATGAGATTGCGGAGGTTGCATGCGAGTCAGACAACGGAACACATTGTCTGTTTATGAAATTGGACTCCATTGCAAATGATCATGGATTGTCATCTTCTGATAATCCGAATAAGGGGGTTCAATTGGACACTGCAAATGATTGTCCTATACAAACTGTGTCATCCAACGAATGTGTCCACAGTCCTATTTCTGTTAAAAGAAAAGGAAGACCCCGTTCGACGAGATTGAAATCCATTGTGGAGAAACTTGGTAAAAGAAGAAAGGGTACGGGTGCAAAAATTAAAGGACAACAGCCTCAAATGGGATGGACTTTGGATACAGATTTTATGGCATGTAGTAACCAATCAGAAGTCATTACGCAAAGTAATCCAACGCAGGGGAATGCTGGTTTGGACAAGTTCATCATGTGA 2259 0.4099 MEQTQTLGLDSIDLLDDVIPQNNCNSIGSVSTNNNSGESSLGLVPKVGMTFETVDELKKVYKQHAIRSGFGVRIRTSKKDDDNQLYYVKLVCSREGTHVSNIPPEKRTIPTQRKACPARVTAVKKDGQWGIISVVEEHNHHLSPQKSRLVRGNRRINMQAKRVIDINDQAGVRLNKSFRSLVFEAGGYDNLNFVERDVRNYIGQQRRALVKDGDGQALFNHFSRMRELNRDFFFEIDVDHDNRITNVFWADGRSRAACVDFGDIVSFDTTYLTNKYDMPFAPFVGVNHHGQSILLGCGLLSSEDTRTFVWLFTCWLRCMSNKEPLGIVTDQCKVVSLAYHEKVPEKLQGYSRYKQIKHDMKQLVYESLNVDAFESGWDKFLTDNGLQENEWLLTLYEDRHRWVPCYLKNNFWAGMSTTQRSEGMNAFFDGFINSTTTLQQFVVQYDNAIRQKAEKECEADFASLNTTIPCGSHSTIERQFQAEYTHAKFAEVQHKFRCKMNCMIKNVYVEAGTSNYRVMEEFMWKGQCADKYHDVLFHHHTLDIQCTCLLFEFRGILCRHCLVMYAQEGVKSVPDKYVLKRWSKLQRRRHTYIRVGSNSHKEEANVKRYDALCKRFYEIAEVACESDNGTHCLFMKLDSIANDHGLSSSDNPNKGVQLDTANDCPIQTVSSNECVHSPISVKRKGRPRSTRLKSIVEKLGKRRKGTGAKIKGQQPQMGWTLDTDFMACSNQSEVITQSNPTQGNAGLDKFIM 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01865 752 ProSiteProfiles Zinc finger SWIM-type profile. 531 569 IPR007527 GO:0008270
Viun5g01865 752 Pfam SWIM zinc finger 543 562 IPR007527 GO:0008270
Viun5g01865 752 Pfam MULE transposase domain 264 345 IPR018289 -
Viun5g01865 752 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 639 IPR031052 GO:0006355
Viun5g01865 752 Pfam FAR1 DNA-binding domain 60 143 IPR004330 -
Viun5g01865 752 SMART 26again6 544 571 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01865 Viun-Chr5 17615446 17618293 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun5g01865 MULE 3e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01865 - - vun:114180824 879.011