Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01847 AATACAGTGAGCACTCTTGGTCGCTTTGTGCTGCTTATATGGTTATTTGTAGTTCTAATAATTAACTCAAGTTACACAGCTAGCCTGACATCAATCCTCACAGTGCAACAACTTTCTTCACTTGTTAAAGGCATTGACAGTTTAATAAATAGCAAAGAGCCTATTGGCTACTTGCAGGGTTCATTTACTCGAACTTATTTGATTGAGGAAATTGGTATTGATGAATCCAGACTGGTTCCTCTAAAAACACCGGAAGAAACTGCAACAACACTAAAAAATGGTCCCCAAAAGGGTGGTGGTTCTGCATATGTTGATGAGCGTGCTTACATAGAACTTTTCCTTTCAAGCCGGTGCGACTTTAGAATTGTCGGTCAAGAGTTCACCCGAAATGGTTGGGGATTTAGTGGATTTGACATGATTTGCAGTGGGAGGGACAAGATTGAAACTCTAGAGCAGTTTAAACAAGTCGAAGAAACAGTTAAGAAGCTAGACTTGGATGGGGTTGTTGTTATTGGTGGTGATGACTCAAACACCAATGCATGCCTCCTTGCTGAGAACTTCAGGAGCAAAAATTTGAAAACACGTGTAATTGGATGCCCTAAAACCATTGATGGTGATTTGAAATGCAAATAA 633 0.3997 NTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSLVKGIDSLINSKEPIGYLQGSFTRTYLIEEIGIDESRLVPLKTPEETATTLKNGPQKGGGSAYVDERAYIELFLSSRCDFRIVGQEFTRNGWGFSGFDMICSGRDKIETLEQFKQVEETVKKLDLDGVVVIGGDDSNTNACLLAENFRSKNLKTRVIGCPKTIDGDLKCK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01847 210 SUPERFAMILY Phosphofructokinase 119 208 IPR035966 GO:0003872|GO:0006096
Viun5g01847 210 Pfam Phosphofructokinase 132 208 IPR000023 GO:0003872|GO:0006096
Viun5g01847 210 SMART GluR_14 2 155 IPR001320 GO:0015276|GO:0016020
Viun5g01847 210 Pfam Ligand-gated ion channel 3 147 IPR001320 GO:0015276|GO:0016020
Viun5g01847 210 Gene3D - 115 210 - -
Viun5g01847 210 SUPERFAMILY Periplasmic binding protein-like II 24 134 - -
Viun5g01847 210 Gene3D - 1 67 - -
Viun5g01847 210 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 4 134 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01847 Viun-Chr5 17073232 17077197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01847 2 135 Ion Channels AT3G51480 70.896 6.40e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01847 K05387 - vun:114184415 399.438