Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01810 ATGGGTATTTCCAGGGATTCTATGCACAAGAGGCGTGCAACTGGAGGCAAGAAGAAGGCGTGGAGAAAGAAGAGAAAGTATGAGCTTGGGCGCCAATCAGCAAACACCAAGTTGTCAAGCAACAAGACAATCCGGAGGATTCGGGTTAGAGGTGGTAATGTAAAATGGAGGGCACTGAGGTTGGATACTGGAAATTACTCATGGGGTAGTGAAGCAGTAACCCGCAAGACTCGTATTCTAGATGTTGTCTACAATGCCTCTAACAATGAGCTTGTGAGAACCCAGACTTTGGTCAAGAGTGCTATTGTTCAGGTTGATGCTGCTCCTTTCAAACAGTGGTACCTTCAACACTATGGTGTTGACATTGGCAGAAAAAAGAAAGCAGCAACCAAGAAGGACTCTACCGAGGAGGGTGATGCTGCTGCTGCTGAAGAAACTAAGAAAAGTAACCATGTGCAGAGAAAAATTGAGAAGCGCCAGAAAGATCGCAAACTTGATGCCCACATTGAAGAGCAATTTGGTGGTGGCAGATTGTTGGCATGTATTTCTTCTCGCCCTGGACAATGTGGCAGGGCTGACGGGTACATTCTGGAAGGTAAGGAGCTGGAGTTTTACATGAAGAAACTCCAGAAAAAGAAGGGAAAGGGTGCTGCTTAA 657 0.4612 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQSANTKLSSNKTIRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKAATKKDSTEEGDAAAAEETKKSNHVQRKIEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQKKKGKGAA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01810 218 MobiDBLite consensus disorder prediction 1 26 - -
Viun5g01810 218 MobiDBLite consensus disorder prediction 125 163 - -
Viun5g01810 218 FunFam 40S ribosomal protein S8 162 215 - -
Viun5g01810 218 NCBIfam ribosomal protein eS8 1 199 IPR001047 GO:0003735|GO:0005840|GO:0006412
Viun5g01810 218 FunFam 40S ribosomal protein S8 32 161 - -
Viun5g01810 218 MobiDBLite consensus disorder prediction 11 26 - -
Viun5g01810 218 CDD Ribosomal_S8e_like 5 197 - -
Viun5g01810 218 ProSitePatterns Ribosomal protein S8e signature. 11 30 IPR018283 GO:0003735|GO:0005840|GO:0006412
Viun5g01810 218 Gene3D - 32 161 - -
Viun5g01810 218 Gene3D - 162 215 - -
Viun5g01810 218 PANTHER 40S RIBOSOMAL PROTEIN S8 1 215 IPR001047 GO:0003735|GO:0005840|GO:0006412
Viun5g01810 218 Pfam Ribosomal protein S8e 5 197 IPR022309 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01810 Viun-Chr5 16548470 16550874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01810 1 206 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 83.981 1.84e-127 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01810 K02995 - gmx:100500112 384.03