Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01751 ATGGGTAAGATTGAACTGGTAGAGAAAATTGTGGTTGTTCCTGAACAACCTACACCACGCAAGAGAATGTTCTTGTCAAATATTGATCTGTCCCTTGTTGTTTACCAAGATTCTGCCTCCTTTTTTGACCCTCCAAACACCCAAATGAGTTTCAGTGAGATTTGTAGCAAATTATACAGTGCACTTGGTAAAATGCTTGTGCAGTATGATTTTATGGCTGGTAGACTAGTGCCAAGTTTGGAAGAGACTCAGAGATTTGAAATTGACTGTAATGGTGCTGGCATTGTAGTTGCAGCTGCAAGAACTGACAGAAAATTGAGTGAATTTGGTGTGATTTCTGCACCTAATCCACAGTTGAGGGAATTAGTTGTTTTTCTGCATGAAGGGTGTGACCAAGAAACTGATCTCAAAGAAAAACCCCTTGCATCCTTACAGCTGACTCAGTTTGGTTGTGGAAGTTTGGCACTTGCTTCTCACTACAATCACTGCACTTTGGACGGTTTTGCAATAAGAGATTTTGAGGTAAACTTAGGTGCATTAACACGAGGTGAGGATCTCATCACAGTACCTAATGCAGATAGAACTCTGCTGAGAGCAAGAACCCCTCCAATTGTAAGCCATCCACATTTTGAGTACTCAAAATCCACTGTGACACACAACTTGTTCACTCTCAGAGGAAAAAGTGGTACCAATGTCAAACAATCCCTGCAAGAAAACCAGATTCATGTTCTTCATTTGTCGCCACAGAGCATTGGTAGCTTCAAAAAGAAAGCCCTGGAGGAGGACAAAACCTTAAAGAACACAAGCACTTTTCAGGTTGTTGCTGCAAAAATATGGAAGGCAAGGAGCATTGCAACAAGGATGTCAGAGGAAAAAGTGTCCACAATGCTGTTTCCAGTGGATGTGAGGAAAAAGGTTGTTCCTGAACTCCCAGATGGGTTTGCAGGAAATGCATTGGTGCCTGGTTTTGCAAGAGCAACAGTGAGGGAGCTGAAGGAGCTAGAAGATGCATGTCACATAAGGAAGGTGCAAGAAGGGCTTGAAAGGTTGAATGATGAGTACATTAAGTCAGGGATAGATTGGTTAGAAGTGAATAAAGGAGCACCTTGTATGGAAGATAGTTTTTCCTTGGTGGCATGGTGGAGATTGGGGTTAGAGGAACAGCTTTTTGCATGGGGTAGACTAAAGTGTGCTACTCCTCTAGAAGTTAAGCCTGGTTTGGTCATGCTATTGCCAGGGCCACAAGATCAAGGAGGCATTAACATTTGCCTTGATTTGCCTGAGGATCAAATGCAAGAGTTTAGTAGGATAATGCTTCAGATTTAG 1326 0.4238 MGKIELVEKIVVVPEQPTPRKRMFLSNIDLSLVVYQDSASFFDPPNTQMSFSEICSKLYSALGKMLVQYDFMAGRLVPSLEETQRFEIDCNGAGIVVAAARTDRKLSEFGVISAPNPQLRELVVFLHEGCDQETDLKEKPLASLQLTQFGCGSLALASHYNHCTLDGFAIRDFEVNLGALTRGEDLITVPNADRTLLRARTPPIVSHPHFEYSKSTVTHNLFTLRGKSGTNVKQSLQENQIHVLHLSPQSIGSFKKKALEEDKTLKNTSTFQVVAAKIWKARSIATRMSEEKVSTMLFPVDVRKKVVPELPDGFAGNALVPGFARATVRELKELEDACHIRKVQEGLERLNDEYIKSGIDWLEVNKGAPCMEDSFSLVAWWRLGLEEQLFAWGRLKCATPLEVKPGLVMLLPGPQDQGGINICLDLPEDQMQEFSRIMLQI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01751 441 Pfam Transferase family 3 435 - -
Viun5g01751 441 Gene3D - 2 214 IPR023213 -
Viun5g01751 441 Gene3D - 225 441 IPR023213 -
Viun5g01751 441 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01751 Viun-Chr5 15732579 15734894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01751 3 441 Monolignol Biosynthesis Gene Families AT5G48930 27.840 1.17e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01751 K15400 - gmx:100801822 781.171