Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01721 ATGGGTTTCAACAGCCATGCAAACTTGTTCTTTGTTTTGTTCATGCTGTGTTTTTATGTGTTGGACGTTTGTATTGCCATAGACAGCATCACATCATCACAATCCATCAAGGACCCAGAAACTCTAATCTCCCAAGATGGTAACTTCACTTTGGGGTTCTTCATTCCTCCAAACTCCACAAACACTTACGTTGGAATTTGGTGGAAGTCTCAATCCACAGTCGTATGGGTTGCTAACAGAAATCAACCACTCAATGATTCTTCAGGAGTTGTTACCTTTTCTGAAGATGGCAATCTTGTGGTGCTGAATGGACAGAATCAAGTTCTTTGGTCGTCAACATTTGAGTCAAACACATCAACCACCAATACAAGTGCACATATTTCAGACGAGGGGAAGCTAGAACTCACAGAAACCACAACGGGGAACAGCTTATGGGATAGTTTTCAACAACCTTCAGATACATTACTGCCCCAAATGAAAATTTCAAGCAATAGAACAGGTAGGGGAGTAAGACTTACATCATGGAAGAACCCTTCTAATCCCTCTGTTGGGAACTTCTCTTTAGGTGTTGTTGAAAGCGGAAAAATCGTTCAAGTCTTCATCTGGAATGAAACTCGACCATACTGGCGCACTGGGCCCTGGAGTGGTGGGATCTTTACAGGGGTAGAGCAGATGGCTAGTGCATATCTAAATAGTTTTACGGTTGTAGATGGTGAAGTCTCTTATAACCCAAGTGCATCTGAATTCGGAATCTACATTCTGAATTCTCAAGGTCAGTTTGAAGAAAAAAGTTGGGATGATGAGAAGAAAGAACTAGAAGTTTCGTGGACGAGTAAACAATCGGATTGTGATGTTTATGGTGTATGCGGGTCGTTCGCAATCTGCGATGCACAGAGTCAAGGAACAAATGGCTCACCAATATGCAGCTGTTTGAAAGGGTTTGAGCCAAACAACAAAGAGGAATGGGATGCACAAAACTGGACTAGTGGATGTTTCAGGAGTACACCCTTGCAGTGTGAAAGAGCCAAAGGTCAAAACACAACTATGGATACAAATGAAGATGAATTTTTGGAACTGCAAATGGTGAAAGTTCCAGATTTTTCTGAATGGTCTAGTGCTGAGCCAGAGACATGCAGAAACCAATGCTTGGAAAATTGCTCTTGTGTTGCGTATTCTCACGATGATGGGATTGGTTGTATGTCTTGGACTGACAATCTACTAGACATCCAACAACTCTCAAATCGAGGACTTCGTCTATATGTTCGTGTAGACTCTTCTGAACTTGAACACGATGAAGGGAAAAAGACAACAATTATCATTTCAGTAACAGTGATAATAGGAATTGTGATCATGGTCACTTGTGCATGTATAATGTGGAGGAGGACTTCCTGTCGGCCAACTAAAACATGGTACTCCATCAAATCAGCTATGAAAAGGGGCAAGAAAGGTTTTTTATATTTCAAGAATGATGAACCATTCGAACAAACAGGCAACAAAGTATTTGAAGAACTGTCACGAGTTAAACTACAGGAGCTGCTCCTGTTTGATTTCGAAAAGCTTGCAACAGCCACGAACAACTTCCACCAGTCCAACCAGCTTGGGCAGGGTGGTTTTGGTCCTGTGTACAAGGGGAAACTGCAAGATGGACAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTGGTCATTTCCAAGCTTCAACACCGTAATCTTGTAAGACTTTTTGGCTGCTGCATTGAAGGTGACGAAAAGATGTTGATCTATGAATACTTGCCAAATAAAAGCTTGGATGTGTTAATCTTTGATCCATCAAAAAGTAAACTCGTAGATTGGAGGAAGCGGTGCAGCATAATAGAAGGAATAGCTCGAGGATTGCTATATCTTCACAGGGACTCCAGACTAAGAATCATACACAGAGATTTGAAGACAAGTAATATCTTGTTAGATGAAGACCTAAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGAACAGAAGATCACGCTAATACTAATAGGATTGTTGGGACATATGGCTACATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCGGATGTGTTTAGCTTTGGTGTTTTGCTGCTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGATGATGAGCATTCTCTTACCCTTTTAGGATTTACCTGGGCACAGTGGAAAGAAGGCAATATATTATCTTTAATAGATTCAGAAATATATGATCCTAATGATGATGAAGATATGTTAAGGGTCACTCACATAGGACTTTTATGTGTACAAGAAGTTGCTTCAGACAGACCCACAATGGCAACAGTAGTTTCTATGCTTAACAGTGATGTTGTGTTTCTTCCTCCTCCAAGTCAACCTGCATTCATCCGGGTGCAAAATGTGGTTAATTCAGAGCCGTCTGAAGAAAATCAAAGAGTTTGTTCCATGAATATTATTAGTATTACCGAAATCCGTGGTAGGTAG 2538 0.4054 MGFNSHANLFFVLFMLCFYVLDVCIAIDSITSSQSIKDPETLISQDGNFTLGFFIPPNSTNTYVGIWWKSQSTVVWVANRNQPLNDSSGVVTFSEDGNLVVLNGQNQVLWSSTFESNTSTTNTSAHISDEGKLELTETTTGNSLWDSFQQPSDTLLPQMKISSNRTGRGVRLTSWKNPSNPSVGNFSLGVVESGKIVQVFIWNETRPYWRTGPWSGGIFTGVEQMASAYLNSFTVVDGEVSYNPSASEFGIYILNSQGQFEEKSWDDEKKELEVSWTSKQSDCDVYGVCGSFAICDAQSQGTNGSPICSCLKGFEPNNKEEWDAQNWTSGCFRSTPLQCERAKGQNTTMDTNEDEFLELQMVKVPDFSEWSSAEPETCRNQCLENCSCVAYSHDDGIGCMSWTDNLLDIQQLSNRGLRLYVRVDSSELEHDEGKKTTIIISVTVIIGIVIMVTCACIMWRRTSCRPTKTWYSIKSAMKRGKKGFLYFKNDEPFEQTGNKVFEELSRVKLQELLLFDFEKLATATNNFHQSNQLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGQEEFMNEVVVISKLQHRNLVRLFGCCIEGDEKMLIYEYLPNKSLDVLIFDPSKSKLVDWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDEDLNPKISDFGMARIFGGTEDHANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRNSSFYDDEHSLTLLGFTWAQWKEGNILSLIDSEIYDPNDDEDMLRVTHIGLLCVQEVASDRPTMATVVSMLNSDVVFLPPPSQPAFIRVQNVVNSEPSEENQRVCSMNIISITEIRGR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01721 845 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 789 - -
Viun5g01721 845 Pfam Protein tyrosine and serine/threonine kinase 528 798 IPR001245 GO:0004672|GO:0006468
Viun5g01721 845 CDD B_lectin 33 151 IPR001480 -
Viun5g01721 845 Pfam PAN-like domain 351 409 IPR003609 -
Viun5g01721 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Viun5g01721 845 Gene3D Phosphorylase Kinase; domain 1 492 602 - -
Viun5g01721 845 SMART ntp_6 351 423 IPR003609 -
Viun5g01721 845 Gene3D Transferase(Phosphotransferase) domain 1 603 803 - -
Viun5g01721 845 CDD PAN_AP_plant 335 423 - -
Viun5g01721 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 603 806 - -
Viun5g01721 845 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 181 IPR036426 -
Viun5g01721 845 SMART serkin_6 527 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01721 845 CDD STKc_IRAK 533 799 - -
Viun5g01721 845 SMART blect_4 33 151 IPR001480 -
Viun5g01721 845 Gene3D - 23 149 IPR036426 -
Viun5g01721 845 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Viun5g01721 845 ProSiteProfiles Protein kinase domain profile. 527 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01721 845 Pfam D-mannose binding lectin 73 176 IPR001480 -
Viun5g01721 845 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Viun5g01721 845 SUPERFAMILY Protein kinase-like (PK-like) 512 822 IPR011009 -
Viun5g01721 845 PIRSF SRK 2 845 IPR024171 GO:0004674
Viun5g01721 845 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 148 - -
Viun5g01721 845 FunFam receptor-like serine/threonine-protein kinase SD1-8 499 602 - -
Viun5g01721 845 ProSiteProfiles PAN/Apple domain profile. 339 424 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01721 Viun-Chr5 15203674 15207048 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01721 511 813 Receptor kinase-like Gene Family AT4G23230 57.096 1.95e-120 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g01721 PK_Tyr_Ser-Thr 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01721 - - gmx:100779455 1206.82