Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01711 ATGCGTTTCGCAAACCATGCAAACCTGTTCTTTGTTCTGTTCATACTATGTTTTTTTGTGTTGGACGTTTGTATTGCCATAGACAGCATCACATCTTCACAATCCATCAAGGACCCTGAAACTCTAAGGTCCAAAGATGGTAACTTTACTTTGGGGTTCTTCACCCCTCAAAACTCCACAAACCGCTACGTTGGAATCTGGTGGAAGTCTCAGTCCACAGTTATATGGGTTGCTAACAGAAACCAACCATTGAATGATTCTTCTGGAATTGTTACAATATCTGAATATGGAAATCTTGTGGTGCTGAATGGACAGAAACAAGTGATTTGGTCAACAAATGTGTCCAAAACATTATCCAATACAAGTTCAGAGTTTTCAGACTCTGGTAAGCTAGTTCTCATGGAAACCGCAACAGGAAACATCTTATGGGATAGTTTTCACCAACCCTCAGATACGCTCTTGCCCGGCATGAAACTTTCAACCAACACAAAAACTAATAAGAAAATAGAACTTACATCATGGAAAAGCCCTTCTGATCCCTCTGTTGGGAGCTTCTCTTCTGGGGTTGTTCAACGCCCTGATATTCTTGAAGCGTTCATTTGGAATGAAACTCGACCATACTGGCGCAGTGGTCCATGGAATGGTGGGGTATTCACAGGGATACCGACCATGTCAACGTATCTTAATGGTTTCAAAGGTGGGGATGATGGCGAAGGAAATATAAATATCTATTACACAGTGCCAAGTGAATTAGATTTTGTAATCTATATGTTGAATTCTAAAGGACAATATGAACAAAAACTGTGGGATGCTGAGAAGAACGAAATGGGAGTTAATTGGACTAGTAAAGTGTCAGATTGTGATGTTTATGGTATGTGTGGACCATTCACAAGCTGTAATGCACAGAGCACACCAATATGTAGCTGTTTGAAAGGATTTGAGCCGAGGAACAAGGACGAATGGAATGGAAAAAACTGGAGTGGTGGATGTGTTAGGAGAACGCCTTTGAAGTGTGAAAGGGTAAGAGATCAAAACACAAGTACTGATGCAAAGGAAGATGGATTTTTTAAACTGCAGATGGTTAAAGTTCCTGATTTTTCAGAAGGTTCTCCTGTTGAGACTGACATATGCAGAAGCCAATGCTTGGGGAATTGCTCTTGTGTTGCTTATTCTCATGATGATGAGATTGGTTGCATGTCTTGGACTGGGAATCTATTAGATATACAACAATTCTCAGAGGGAGGACTTGATCTATATCTTCGTGTAGCTTACTCTGAACTTGATAAAGGGTCAAACAAAAAAATCATCATTACAACAGCAGTGATAGTAGCAACTGTGATCATGGTTACCGGTGCATATTTCATGTGGAGGACTTCCAATCATCCAGCTAAATTTTGGCAGTTAATTAACTCAGTAAGGAAAGTGAACAACGATGCTTTTATAGAATATAATAATGGTGGAACACCAGAACATGAAAGCCATAGTGTAATTGAAGAACTGTCACAAGTTAAACTACAGGAACTGTTACTATTTGATTTTAAAAGGGCTGCAGCAGCCACAGACAACTTCCATCTTTCCAACAAACTTGGGCAAGGTGGTTTTGGTCCTGTGTACAAGGGGCAACTGGAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCTAGAGCCTCTGGACAAGGTCTAGAAGAATTCATGAACGAAATAGTCGTGATTTCCAAGCTTCAACATCGCAATCTTGTAAAACTTTTTGGCTGCTGTGTTGAAGGGGATGAGAAGATGCTGATATATGAATACATGCCAAACAAAAGTTTGGATGTGTTTATCTTTGATCCATCAAAGTGTAAACTTCTAGATTGGAGGAAGCGCAGTAGCATAATAGAAGGAATAGCTCGAGGACTACTTTATCTACACAGAGACTCCAGACTAAAAATTATACACAGAGATTTGAAGGCAAGTAATATATTGCTAGATGAAGACCTAAATCCAAAAATATCAGATTTTGGTATGGCTAGAATCTTTGGTGGAACACAAGATCAAGTCAATACCAGTAGAGTTGTTGGAACCTATGGCTACATGTCTCCTGAATATGCAATGGAAGGACTATTTTCAGAAAAATCAGATGTTTTTAGCTTTGGTGTTCTGGTACTAGAGATTATTAGTGGAAGAAGAAGCTCAAGTTTTTTTGGCAATATGCATGCTCTTAGCCTTTTAGGATTTGCTTGGACACAATGGAAGGAAGGAAATGCATTATCTTTGGTAGATTCAGAACTATATGATCCTATTCATCATAAAGATATCTTAAGGTGCATACACATAGCTCTTCTATGTGTACAAGAACTTTCTGTAGACAGACCCACTATGGCTACAGTAATTTCTATGCTCAGCAATGAGTTTGTGCTTCCTGCTCCAAGTAATTCTGCATTCATCCAGCGACAAAAAATGATGAATTCGACGTCATCGGAAGAAACTCAGAGATTTCGCTCTATCAATGTTGTTAGTATAACAGAAATTCAAGGTAGAGGCACTGTCAAATCTTACAGTGGCCATTTGGTTCATGGTAAAGAGTTTCAGGAACCGTGTGCAAACATGTTCTTTGTTTTGTTCATACTGTGTTGTTATGTTTTGGATATTGGTAATGCCACAGACATTATCTCCTCATCTCAGTTCATCAAGGACAATGAAACTATAACCTCCGCTGGTGGCAACTTCACCTTGGGGTTCTTCACCCCTCAAAATTCTACCAATCGTTATGTGGGAATTTGGTGGCAAACCAAATCCACTGTCATATGGGTGGCTAACAGAAACCAACCTCTGAATCATTCTTCTGGGGCTGTTACGATTTCTGAAGATGGCAATCTTGTGGTGTTGAATGGTCAGAATCAAGTGATTTGGTCAACAAATGTGTCCACAGCATCATCGAATACAAGTGCCCAGCTTTCAGATTCTGGTAAGCTAGTTCTCACTGAAACCACAAGGGGAACATTGTGGGATAGTTTTCAGCAACCTTCGAATACGTTAATGCCCGGAATGAAAACTTTAACCAACGCAAAAACAGGTAGGAAAGTAGAACTTACAGCATGGAAAAGCCCTTCAAATCCCTCCGTTGGGAGCTTCACTTCCAGTGTTCTTCGACGCATAAATATACTCGAGGTGTTCATTTGGAATGAAACTCGACCGTACTGGCGCAGTGGTCCATGGAATGGTGTGATCTTTACAGGGATACCCATGTCATCGTTTCTTTATTCTTTCAAAGCTGGGGATGATGACGAAGGAAATACATATTTCTATTACACGGTACCAAGTCCGCTGGAGATTTTTATCTATGTGATGAATTCGCGAGGCCAGTATGAACAACTATCGTGGAATGATAAGAAGGAAGAAATGGAAATTTCGTGGAGTAGTCATGAATCAGATTGTGATGTTTATGGAATATGTGGGTCATTTTCTATTTGTAATGCAAAAAACTCACCAATTTGCAGTTGTTTGAAAGGGTTTGAGCCGAGGAACAAAGAAGAATGGAATAGACAAAACTGGTCAAGTGGGTGTGTTAGGAGCACACCTTTGAAGTGTGAAAGGGTCAATCAAAACGTAAGTGTTAAGGAAGATGGTTTTTCGCAACTGCAAATGGTTAAGGTTCCTGATTTTCCAGAAGGGTCTCCTGTTGACACTGAATGCAGAAGGCAATGCTTGGAGAATTGCTCTTGTGTTGCTTATTCCTATGATGTTGGAATTGGTTGCATGTCTTGGACTGGGAATCTGCTAGACATACAACAATTCTCAGAGGGAGGACTTGAGTTATATGTTCGTGTAGCCGATTCTGATCTTGAACATGATAAAGGGACACACACAGCAATCATCGTCGGAATTACAGTGACAGTAGTATCAGTCATCATAGTTATTTGTGCATATGTCATGTGGAGGACTTCCAATCACCCAGCTAAAATATGGCACGCAATCAGATCAGCAAGGAATAGGAACATCAAAGATTTCCAACGATTGAAAAAAGGTGAAACACCAGAACATCCTAGTCACAAAGTAATTGAAGAACTGTCACAAGTTAAACTCCAGGAGCTGTTACTGTTTGATTTTGAAAGGCTTGCAACAGCCACAAACAACTTCCACCTGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCTGTGTACAAGGGGAAACTGCAAGATGGACAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTAGTGGTCATTTCCAAGCTTCAACACCGTAATCTTGTAAGACTTTTTGGCTGCTGCATTGAAGGTGACGAAAAGATGTTGATCTATGAATACTTGCCAAATAAAAGCTTGGATGTGTTAATCTTTGATCCATCAAAAAGTAAACTCGTAGGTTGGAGGAAGCGGTGCAGCATAATAGAAGGAATAGCTCGAGGATTGCTATATCTTCACAGGGACTCCAGACTAAGAATCATACACAGAGATTTGAAGACAAGTAATATCTTGTTAGATGAAGACCTAAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGAACAGAAGATCACGCTAATACTAATAGGATTGTTGGGACATATGGCTACATGTCCCCTGAATATGCAATGCAAGGCCTGTTTTCAGAGAAATCGGATGTCTTTAGCTTTGGTGTTTTAGCACTAGAGATTGTAACTGGAAGAAGAAATTCAAGCTTTTATGATGATGAACATGTTCTTAGCCTCTTGGGATTTGCCTGGATACAATGGAGGGAAGGCAACATATCTTCTATAATAGATCCAGAAGTATATGATCCTAGTTATCATATAGATATTTTAAGGTGCATTAACATAGCTCTTCTGTGTGTACAAGAACTTGCTGTAGACAGACCCACTATGGCTGCAGTAATTTCTATGCTTAACAGTGAGGTTGCGTTTCTTCCTCCTCCAAGCCAACCTGCATTCATCCTGAGGCATAATCTGCTGAATTCGGAGCCATGTAAAGGAAGTCATAGATTTTCCTCCACCAACACTGCTAGCATTACAACTATCTATGGAAGATAG 5076 0.3995 MRFANHANLFFVLFILCFFVLDVCIAIDSITSSQSIKDPETLRSKDGNFTLGFFTPQNSTNRYVGIWWKSQSTVIWVANRNQPLNDSSGIVTISEYGNLVVLNGQKQVIWSTNVSKTLSNTSSEFSDSGKLVLMETATGNILWDSFHQPSDTLLPGMKLSTNTKTNKKIELTSWKSPSDPSVGSFSSGVVQRPDILEAFIWNETRPYWRSGPWNGGVFTGIPTMSTYLNGFKGGDDGEGNINIYYTVPSELDFVIYMLNSKGQYEQKLWDAEKNEMGVNWTSKVSDCDVYGMCGPFTSCNAQSTPICSCLKGFEPRNKDEWNGKNWSGGCVRRTPLKCERVRDQNTSTDAKEDGFFKLQMVKVPDFSEGSPVETDICRSQCLGNCSCVAYSHDDEIGCMSWTGNLLDIQQFSEGGLDLYLRVAYSELDKGSNKKIIITTAVIVATVIMVTGAYFMWRTSNHPAKFWQLINSVRKVNNDAFIEYNNGGTPEHESHSVIEELSQVKLQELLLFDFKRAAAATDNFHLSNKLGQGGFGPVYKGQLEDGQEIAVKRLSRASGQGLEEFMNEIVVISKLQHRNLVKLFGCCVEGDEKMLIYEYMPNKSLDVFIFDPSKCKLLDWRKRSSIIEGIARGLLYLHRDSRLKIIHRDLKASNILLDEDLNPKISDFGMARIFGGTQDQVNTSRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLVLEIISGRRSSSFFGNMHALSLLGFAWTQWKEGNALSLVDSELYDPIHHKDILRCIHIALLCVQELSVDRPTMATVISMLSNEFVLPAPSNSAFIQRQKMMNSTSSEETQRFRSINVVSITEIQGRGTVKSYSGHLVHGKEFQEPCANMFFVLFILCCYVLDIGNATDIISSSQFIKDNETITSAGGNFTLGFFTPQNSTNRYVGIWWQTKSTVIWVANRNQPLNHSSGAVTISEDGNLVVLNGQNQVIWSTNVSTASSNTSAQLSDSGKLVLTETTRGTLWDSFQQPSNTLMPGMKTLTNAKTGRKVELTAWKSPSNPSVGSFTSSVLRRINILEVFIWNETRPYWRSGPWNGVIFTGIPMSSFLYSFKAGDDDEGNTYFYYTVPSPLEIFIYVMNSRGQYEQLSWNDKKEEMEISWSSHESDCDVYGICGSFSICNAKNSPICSCLKGFEPRNKEEWNRQNWSSGCVRSTPLKCERVNQNVSVKEDGFSQLQMVKVPDFPEGSPVDTECRRQCLENCSCVAYSYDVGIGCMSWTGNLLDIQQFSEGGLELYVRVADSDLEHDKGTHTAIIVGITVTVVSVIIVICAYVMWRTSNHPAKIWHAIRSARNRNIKDFQRLKKGETPEHPSHKVIEELSQVKLQELLLFDFERLATATNNFHLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGQEEFMNEVVVISKLQHRNLVRLFGCCIEGDEKMLIYEYLPNKSLDVLIFDPSKSKLVGWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKTSNILLDEDLNPKISDFGMARIFGGTEDHANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLALEIVTGRRNSSFYDDEHVLSLLGFAWIQWREGNISSIIDPEVYDPSYHIDILRCINIALLCVQELAVDRPTMAAVISMLNSEVAFLPPPSQPAFILRHNLLNSEPCKGSHRFSSTNTASITTIYGR 1691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01711 1691 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 180 IPR036426 -
Viun5g01711 1691 Gene3D - 876 1000 IPR036426 -
Viun5g01711 1691 Gene3D - 23 147 IPR036426 -
Viun5g01711 1691 ProSiteProfiles Bulb-type lectin domain profile. 881 1000 IPR001480 -
Viun5g01711 1691 CDD PAN_AP_plant 1186 1271 - -
Viun5g01711 1691 ProSiteProfiles Protein kinase domain profile. 1373 1651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01711 1691 Gene3D Phosphorylase Kinase; domain 1 486 598 - -
Viun5g01711 1691 Gene3D Phosphorylase Kinase; domain 1 1336 1448 - -
Viun5g01711 1691 SMART blect_4 887 1002 IPR001480 -
Viun5g01711 1691 SMART blect_4 33 149 IPR001480 -
Viun5g01711 1691 Pfam Protein tyrosine and serine/threonine kinase 1374 1584 IPR001245 GO:0004672|GO:0006468
Viun5g01711 1691 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Viun5g01711 1691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Viun5g01711 1691 ProSiteProfiles Protein kinase domain profile. 523 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01711 1691 Pfam PAN-like domain 1199 1256 IPR003609 -
Viun5g01711 1691 Pfam PAN-like domain 351 408 IPR003609 -
Viun5g01711 1691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 877 999 - -
Viun5g01711 1691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1449 1652 - -
Viun5g01711 1691 CDD PAN_AP_plant 334 423 - -
Viun5g01711 1691 CDD B_lectin 887 1002 IPR001480 -
Viun5g01711 1691 FunFam Os04g0303100 protein 921 1060 - -
Viun5g01711 1691 Pfam D-mannose binding lectin 73 175 IPR001480 -
Viun5g01711 1691 Pfam D-mannose binding lectin 927 1028 IPR001480 -
Viun5g01711 1691 SUPERFAMILY Protein kinase-like (PK-like) 1357 1644 IPR011009 -
Viun5g01711 1691 FunFam receptor-like serine/threonine-protein kinase SD1-8 1345 1448 - -
Viun5g01711 1691 ProSiteProfiles PAN/Apple domain profile. 1190 1271 IPR003609 -
Viun5g01711 1691 CDD STKc_IRAK 1379 1645 - -
Viun5g01711 1691 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 801 - -
Viun5g01711 1691 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Viun5g01711 1691 SMART ntp_6 1199 1270 IPR003609 -
Viun5g01711 1691 SMART ntp_6 350 422 IPR003609 -
Viun5g01711 1691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Viun5g01711 1691 SUPERFAMILY Protein kinase-like (PK-like) 508 810 IPR011009 -
Viun5g01711 1691 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Viun5g01711 1691 Pfam S-locus glycoprotein domain 1061 1168 IPR000858 GO:0048544
Viun5g01711 1691 CDD B_lectin 33 149 IPR001480 -
Viun5g01711 1691 ProSiteProfiles PAN/Apple domain profile. 338 423 IPR003609 -
Viun5g01711 1691 SMART serkin_6 1373 1651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01711 1691 SMART serkin_6 523 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01711 1691 SUPERFAMILY alpha-D-mannose-specific plant lectins 918 1033 IPR036426 -
Viun5g01711 1691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1494 1506 IPR008271 GO:0004672|GO:0006468
Viun5g01711 1691 CDD STKc_IRAK 529 794 - -
Viun5g01711 1691 FunFam receptor-like serine/threonine-protein kinase SD1-8 495 598 - -
Viun5g01711 1691 Gene3D Transferase(Phosphotransferase) domain 1 1449 1649 - -
Viun5g01711 1691 Gene3D Transferase(Phosphotransferase) domain 1 599 801 - -
Viun5g01711 1691 FunFam Os04g0303100 protein 67 207 - -
Viun5g01711 1691 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 867 1635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01711 Viun-Chr5 15131328 15144537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01711 425 811 Receptor kinase-like Gene Family AT4G05200 51.662 1.21e-116 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Viun5g01711 PK_Tyr_Ser-Thr 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01711 - - tpra:123892366 2278.44