Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01705 ATGTCTCTTCCCACACTCCTAGATACTAAGGAAAACACTACTTTCCCTAAACTCAAGATCAAAGATGGAGGCACAACACCCTCTTCTTCACACAACTCTTTCCCTCCCATACCCACCACTACACATAACACACCCCAAATCGAAGATAGCGATGAAGACGTTTTCACCGTTCCAGATGTAGAAACTGCACCAAGTGTTGATTGTGCAGGAACAAATCCATGTAGCAGTAATGTTAATGAAAGTAAGTTGAGAGATCCACCGATACATTATTCTGGTTTCACCGGAAAACGCCGTCAGGGAAGAAACCCCGTCGACAAAGAGCATAGACGCCACAAACGGTTGTTAAGGAACAGGGTTTCTGCTCAACAGGCTCGTGAAAGGAAAAAGGTTTACGTAAATGACTTGGAATCAAGAGCTGTGGAGTTGGAAGAGAAAAACACCAATTTAGAAGAACAAATTTCAACGTTAATCAATGAAAACACCATGCTGCGAAAGGTTCTCATGAACACCAGGGCCAAAGTTAACCAAAACAATGAAGCGTAG 543 0.4291 MSLPTLLDTKENTTFPKLKIKDGGTTPSSSHNSFPPIPTTTHNTPQIEDSDEDVFTVPDVETAPSVDCAGTNPCSSNVNESKLRDPPIHYSGFTGKRRQGRNPVDKEHRRHKRLLRNRVSAQQARERKKVYVNDLESRAVELEEKNTNLEEQISTLINENTMLRKVLMNTRAKVNQNNEA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01705 180 MobiDBLite consensus disorder prediction 1 49 - -
Viun5g01705 180 SUPERFAMILY Leucine zipper domain 109 168 IPR046347 GO:0003700|GO:0006355
Viun5g01705 180 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 27 176 IPR044280 GO:0000981|GO:0045944
Viun5g01705 180 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 112 127 IPR004827 GO:0003700|GO:0006355
Viun5g01705 180 MobiDBLite consensus disorder prediction 23 45 - -
Viun5g01705 180 Gene3D Single helix bin 128 169 - -
Viun5g01705 180 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 107 170 IPR004827 GO:0003700|GO:0006355
Viun5g01705 180 MobiDBLite consensus disorder prediction 63 109 - -
Viun5g01705 180 Coils Coil 125 166 - -
Viun5g01705 180 CDD bZIP_HY5-like 110 160 - -
Viun5g01705 180 SMART brlzneu 105 169 IPR004827 GO:0003700|GO:0006355
Viun5g01705 180 MobiDBLite consensus disorder prediction 68 82 - -
Viun5g01705 180 Pfam bZIP transcription factor 106 165 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01705 Viun-Chr5 14952689 14956738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01705 94 177 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 76.190 2.06e-37 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun5g01705 bZIP_1 5.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01705 K16241 - gmx:100783826 179.104