Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01681 ATGAGTATGGCTATGTCAATCACACTCATTCTTCTACCATTAATGTACCTCCAACGTTCATCATCTTCTTCATCATCCTTGAGAATGGGTTCTTCTCTCTCTGTGGAAAATCCACAACATATTCTCATGTCACCAAACGCCATGTTTTCTGCTGGCTTCTTAGCCATTGGCGAGAACGCATATTCGTTTGCAATATGGTTCACGGAGCCTCAATTTCACAGCCCAAGTTCTGTCACATGGATGGCAAACCGTGACCAACCTGTGAATGGGAAAAGCTCAAAATTTTCCCTTACAAACGATGGCAACATGTTCTTGATTGATGCTGCTCTTAAATCTGTTTGGTCTTCAAACACTGCTTCATCAGCCCCAGTGGAGTTGCATCTCAAAGACAATGGCAATCTTGTGTTACACCAGCTTCAAGGAACCGTTCTGTGGCAAAGTTTCGATTTTCCAACCGACACTCTCGTTCCTGGTCAGCCTCTTACCAGATACACGCAACTTGTGTCTTCAAGAAGCGAGAGTAACCATTCATCTGGTTTCTACAAGTTTTTCTTCGATGATGACAACGTTCTCGGTCTTCAGTATGATGGTCCTGATGTTTCAAGCTCCTACTGGCCACAACCTTGGTTGATAAGTTGGGATGCTGGAAGGACTAATTTCAACAGTAGTAGAATTGGCGTGTTGAATTCTCTGGGACTTTTCAGTTCAACAGATAATTTCAGTTTCGTGACATCTGATTATGCCACAGTGCTGCAGAGAAGGTTGAAAGTGGAGTGTGATGGCAATGTTCGGGTGTACAGTCGAAATAATGTTTTGCAGAATTGGTATGTTTCATGGCAAGCAATTTCTAGTGGTTGCGTACCTCACGGGATTTGTGGACCCAACAGCTTCTGTGTTTATGTTCATGGGAGTGGAAGAAAATGTTTGTGTCTTCCGGGGCATAGATTGAAGAACCACAGTGATTGGTCTCAAGGGTGTGAACCCTTGTTTCAGCTTACCTGCCATAGGAATGAGTCTATGTTCTTGGAGATTCCAAATGTTGAGTTTTACGGCTATGACAATCATTATGTAGAAATCAGTAACTACAGTGCCTGTGAGAGTTTATGCTTGCAAGACTGCAGTTGTAAGGGGTTTCAACACTCCTATAGTGATGATAAACGCTTTTATAGGTGCTATACGAAAACGCAATTTCTCAATGGAAGACGTTCACCGGTATTCCAAGGAACAACATACCTGAGATTGCCCAGAAGTAATAGCTTCTCCCACAAAGAACATGACAGAGAATCTTTAAATGATCATGTTTGTTCAGTTCAACTTCAACGAGCTTATATCAAAACACAAGCAAACCATTATGTGAAGATTTTCCTGTGGTTTTCCACCGCCCTTGGAGCTTTTGAAGTGATTTGCATTGTTTTGATTTGGTGTCTGGTTAGGACCAGACAAAAGTCTAATCGAGAGGGCTACCATCTTGCAGGAACAGGATTCAGAAAATATAGTTATTCAGAGTTGAAGAAGGCGACAAAGGGGTTCAGTGAAGAGATCGGAAGGGGTGGAGGAGGGGTTGTGTACAAAGGTATTTTATCAGATGAAAGACACGCAGCAATCAAGAGACTGAATGAGGCTAAACAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGCATCATTGGAAGGCTTAACCACATGAACTTGATCGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATACAACATTGCCCTTGGAACAGCAAGAGTTCTGGCATATCTTCATGAACAGTGCTTGGAATGGATACTGCACTGTGATATAAAGCCCCAGAACATACTTCTTGATGCTAATTATGAAGCCAAGGTTGCAGATTTTGGGTTGTCTAAGCTCCTGAAGAGAGATGATAACCTGAGCAATTCAAGCATCTCTATGATCAGAGGGACCAGAGGGTATATGGCTCCTGAATGGGTTTATAAGCTGCCAATCACATCGAAGGTGGATGTTTATAGCTATGGAATTGTTGTTCTGGAAATGGTAACTGGGAAAAGCACAACAGGAAGGATTGATAATGGTGAAGAAAGATATGATGGGAGGGTGGTGGAATGGGTGAGAGAGAAAAGGGGCAACAGTAGTAACTCATATTGGGTGGAGGAGATAATTGCACCTGATATTGGAGCTGATTATGATCATAGGAAGATGGAAATTTTGATTACAGTGGCTTTGAACTGTGTGATGGAAAACAGAGATTCAAGGCCCACCATGAGCCAAGTAGTTGAGATGCTTCAGTGA 2355 0.4242 MSMAMSITLILLPLMYLQRSSSSSSSLRMGSSLSVENPQHILMSPNAMFSAGFLAIGENAYSFAIWFTEPQFHSPSSVTWMANRDQPVNGKSSKFSLTNDGNMFLIDAALKSVWSSNTASSAPVELHLKDNGNLVLHQLQGTVLWQSFDFPTDTLVPGQPLTRYTQLVSSRSESNHSSGFYKFFFDDDNVLGLQYDGPDVSSSYWPQPWLISWDAGRTNFNSSRIGVLNSLGLFSSTDNFSFVTSDYATVLQRRLKVECDGNVRVYSRNNVLQNWYVSWQAISSGCVPHGICGPNSFCVYVHGSGRKCLCLPGHRLKNHSDWSQGCEPLFQLTCHRNESMFLEIPNVEFYGYDNHYVEISNYSACESLCLQDCSCKGFQHSYSDDKRFYRCYTKTQFLNGRRSPVFQGTTYLRLPRSNSFSHKEHDRESLNDHVCSVQLQRAYIKTQANHYVKIFLWFSTALGAFEVICIVLIWCLVRTRQKSNREGYHLAGTGFRKYSYSELKKATKGFSEEIGRGGGGVVYKGILSDERHAAIKRLNEAKQGEGEFLAEVSIIGRLNHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYNIALGTARVLAYLHEQCLEWILHCDIKPQNILLDANYEAKVADFGLSKLLKRDDNLSNSSISMIRGTRGYMAPEWVYKLPITSKVDVYSYGIVVLEMVTGKSTTGRIDNGEERYDGRVVEWVREKRGNSSNSYWVEEIIAPDIGADYDHRKMEILITVALNCVMENRDSRPTMSQVVEMLQ 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01681 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Viun5g01681 784 PIRSF SRK 1 784 IPR024171 GO:0004674
Viun5g01681 784 Gene3D Transferase(Phosphotransferase) domain 1 583 784 - -
Viun5g01681 784 Pfam PAN-like domain 334 396 IPR003609 -
Viun5g01681 784 SUPERFAMILY Protein kinase-like (PK-like) 488 783 IPR011009 -
Viun5g01681 784 SMART serkin_6 508 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01681 784 CDD B_lectin 42 151 IPR001480 -
Viun5g01681 784 ProSiteProfiles PAN/Apple domain profile. 334 418 IPR003609 -
Viun5g01681 784 ProSiteProfiles Bulb-type lectin domain profile. 18 149 IPR001480 -
Viun5g01681 784 ProSiteProfiles Protein kinase domain profile. 508 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01681 784 SMART blect_4 32 151 IPR001480 -
Viun5g01681 784 CDD STKc_IRAK 514 784 - -
Viun5g01681 784 Gene3D Hepatocyte Growth Factor 340 422 - -
Viun5g01681 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 78 167 IPR036426 -
Viun5g01681 784 FunFam S-receptor-like serine/threonine-protein kinase 477 582 - -
Viun5g01681 784 PANTHER OS07G0415500 PROTEIN 6 784 - -
Viun5g01681 784 Pfam D-mannose binding lectin 78 163 IPR001480 -
Viun5g01681 784 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Viun5g01681 784 FunFam Putative receptor protein kinase ZmPK1 21 150 - -
Viun5g01681 784 Pfam S-locus glycoprotein domain 239 317 IPR000858 GO:0048544
Viun5g01681 784 Gene3D - 20 150 IPR036426 -
Viun5g01681 784 Gene3D Phosphorylase Kinase; domain 1 474 582 - -
Viun5g01681 784 FunFam Putative receptor-like protein kinase 583 784 - -
Viun5g01681 784 Pfam Protein kinase domain 511 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01681 784 CDD PAN_AP_plant 330 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01681 Viun-Chr5 14665327 14667997 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01681 498 783 Trihelix Transcription Factor Family AT5G38560 42.466 1.87e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun5g01681 Pkinase 1.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01681 - - gmx:100783758 1210.28