Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01680 ATGGCTTTATCAATCACACTCCTTCTTCTACCATTAATGTATTTCCAGCGTTCATCTTCTTCATCATCAACCTTGAGAATGGGTTCTTCCCTCTCTGTGGAAAATCCACAGCATATTCTCATCTCACCAAACGCCATGTTTTCTGCTGGCTTTTTAGCCATTGGTGAGAACGCATATTCGTTTGCAATATGGTTCACGGAGCCTCATTTTCACAGCCCCAACACTGTCACATGGATGGCAAACCGTGACCAACCTGTCAACGGAAAACGCTCAAAACTTTCCCTCACAAACGATGGCAACGTTGTCTTAGTCGATGCTGCTTTCAACACTGCTTGGTCTTCAAACACCGATTCATTAGACCCAGTAGAGTTGCATCTCAATGACGATGGTAATCTAGTATTACGCCAGCTTCAAGGAACCATTCTGTGGCAAAGTTTCGATTTTCCGACCGACACTCTCGTTCCTGGTCAGCCTCTTACCAGATACACATATCTTCTGTCTTCAAGAAGCCACACAAACCATTCATCTGGTTTCTACAAGCTGTATTTCGGCGATGAGAACATTCTTCGTCTTGTATATGATGGCCCTGATGTGTCCAGCAACTACTGGCCAACTCCCTGGCGTGTAAGTTGGGATGTTGGTAGAACTTTATTCAATAGCAGTAGAATTGCTGTGTTGAATTCTTTTGGGGCCTTTCATTCCTCGGATAACTTCACTTTTGTGACATCAGATTATGGAACCGTGCTGCAGAGAAGGTTGAAACTGGACTCTGATGGTAATTTCCGAGTGTATAGTCGAAATAGTGTGTTAGAGAAATGGTATGTTTCGTGGCAAGCGATTAGGAATGGCTGCATGATTCATGGGGTTTGTGGAGCCAACAGCACGTGTGGTTTTGATCATGAGAGTGGGAAAAAGTGCGAGTGTATTCCAGGGTACAGATGGAACAACCTCAGTGATTGGTCTCATGGGTGTAAACCCATGTTCGAGCTCACCTGCGATAAGAATGAGTCAACCTTCTTGGGGGTGCGGGGTGTTGAATTTTACGGGTATGATTTTTATTATGTAGAAGTTAGTAACTTTACTGCTTGTGAAAAATTGTGCTTGCAAAATTGCAGCTGTGTAGGGTTTCAGCACTCCTACACTGACAAAAGGGGCATAGCCTTCAAGTGTTATACCAAAACAAAATTGCTCAATGGACGGCGTTTACCGAATTTCCCAGGAACAACATACTTGAGAGTGTCCAAAAGTTATAGCTTCTCTGTGAAAGAATCTTCTAATAATCACACTGCACTTGATCATCGAGTTTGTTCAGTTCAACTTCAAAGAGATTATATACAACCACAGGGAAGCCGTATTGTGAGTGTTTTTCTGTGGTTTGCTTCCGCACTTGGAGCTTTTCAAATGGTTTGTGGTTTTGTGATTTGGTGCTTCCTAATTAGAACCAACCGAAAGAGTAATGCAGATCAAAAGGGGTACCATCTTACAGCAACGGGATTCAGAAAATTTACCTACTCCGAGCTGAAAAAGGCTACGAAGGGGTTCAGTAAAGAGATTGGAAGAGGTGGGGGAGGGGTTGTGTACGAAGCTATTTTATCAGATGGAAGACATGCAGCAATTAAGAGACTGAATGAAGCTAAACAAGGAGAAGGGGAGTTTCTTGCTGAAGTGAGCATCATTGGAAGGATTAACCACATGAACTTGATCGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTATATGGAGAATGGTTCTTTGGCAGAAAATCTCTCATCCAACACACTTGATTGGAGTAAGAGATACAACATTGCAATTGGAACTGCAAGAGTTCTAGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAAAATATACTTCTGGATTCCAATTATGAGCCAAAGTTAGCAGATTTTGGGTTGTCTAAGCTCCTCAACAGAAACAACCCCAACAATCCAAGCATCTCTATGATCAGAGGGACCAGAGGGTATATGGCACCTGAGTGGGTTCTTAACTTGCCAATCACATCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTGTTGGAACTGGTAACTGGGAAAAGCACAAGTGTCCAAGAAATTAATGGTGAAGAGACATATGATGGGAGGCTGGTGGCATGGGTGAGAGAAAAGAGAAGCAACATGGACTCACATTGGGTTGAACAAATAGTTGAACCTGCTATTGGACCTGATTATGATAGAAGTAAGATGGAAATGTTGACAACAGTGGCTTTGAACTGTGTAATGGAAGACAGAGATTCAAGGCCTACCATGAGCCAAGTAGTTGAGATGCTTCAAGCTCATGGACGTGAATCTGATTGA 2382 0.4274 MALSITLLLLPLMYFQRSSSSSSTLRMGSSLSVENPQHILISPNAMFSAGFLAIGENAYSFAIWFTEPHFHSPNTVTWMANRDQPVNGKRSKLSLTNDGNVVLVDAAFNTAWSSNTDSLDPVELHLNDDGNLVLRQLQGTILWQSFDFPTDTLVPGQPLTRYTYLLSSRSHTNHSSGFYKLYFGDENILRLVYDGPDVSSNYWPTPWRVSWDVGRTLFNSSRIAVLNSFGAFHSSDNFTFVTSDYGTVLQRRLKLDSDGNFRVYSRNSVLEKWYVSWQAIRNGCMIHGVCGANSTCGFDHESGKKCECIPGYRWNNLSDWSHGCKPMFELTCDKNESTFLGVRGVEFYGYDFYYVEVSNFTACEKLCLQNCSCVGFQHSYTDKRGIAFKCYTKTKLLNGRRLPNFPGTTYLRVSKSYSFSVKESSNNHTALDHRVCSVQLQRDYIQPQGSRIVSVFLWFASALGAFQMVCGFVIWCFLIRTNRKSNADQKGYHLTATGFRKFTYSELKKATKGFSKEIGRGGGGVVYEAILSDGRHAAIKRLNEAKQGEGEFLAEVSIIGRINHMNLIEMWGYCAEGKHRLLVYEYMENGSLAENLSSNTLDWSKRYNIAIGTARVLAYLHEECLEWILHCDIKPQNILLDSNYEPKLADFGLSKLLNRNNPNNPSISMIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLELVTGKSTSVQEINGEETYDGRLVAWVREKRSNMDSHWVEQIVEPAIGPDYDRSKMEMLTTVALNCVMEDRDSRPTMSQVVEMLQAHGRESD 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01680 793 CDD STKc_IRAK 518 786 - -
Viun5g01680 793 ProSiteProfiles Bulb-type lectin domain profile. 16 147 IPR001480 -
Viun5g01680 793 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 166 IPR036426 -
Viun5g01680 793 FunFam Putative receptor protein kinase ZmPK1 19 148 - -
Viun5g01680 793 Pfam Protein kinase domain 515 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01680 793 PIRSF SRK 1 792 IPR024171 GO:0004674
Viun5g01680 793 Gene3D Transferase(Phosphotransferase) domain 1 587 793 - -
Viun5g01680 793 Gene3D Hepatocyte Growth Factor 341 408 - -
Viun5g01680 793 SMART blect_4 30 149 IPR001480 -
Viun5g01680 793 Pfam S-locus glycoprotein domain 232 313 IPR000858 GO:0048544
Viun5g01680 793 ProSiteProfiles Protein kinase domain profile. 512 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01680 793 SMART serkin_6 512 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01680 793 Pfam PAN-like domain 332 395 IPR003609 -
Viun5g01680 793 CDD B_lectin 40 149 IPR001480 -
Viun5g01680 793 SUPERFAMILY Protein kinase-like (PK-like) 491 785 IPR011009 -
Viun5g01680 793 CDD PAN_AP_plant 328 414 - -
Viun5g01680 793 FunFam Serine/threonine-protein kinase 587 793 - -
Viun5g01680 793 PANTHER OS07G0415500 PROTEIN 6 787 - -
Viun5g01680 793 ProSiteProfiles PAN/Apple domain profile. 332 414 IPR003609 -
Viun5g01680 793 Gene3D - 17 147 IPR036426 -
Viun5g01680 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Viun5g01680 793 FunFam S-receptor-like serine/threonine-protein kinase 481 586 - -
Viun5g01680 793 Gene3D Phosphorylase Kinase; domain 1 477 586 - -
Viun5g01680 793 Pfam D-mannose binding lectin 75 160 IPR001480 -
Viun5g01680 793 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01680 Viun-Chr5 14643355 14645736 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01680 440 785 Receptor kinase-like Gene Family AT3G58690 35.135 2.37e-64 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun5g01680 Pkinase 2.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01680 - - vra:106758305 1439.09