Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01677 ATGGGTTTCTCAATCTCACTCTTTTTCCTTCTCTTGCCTCTTTCGTTCCAATTTTCATCTTCCCTATTCTCGTTGATCAAGGGGTCCTCTCTCTCAGTGGAGAAACAAGCACACGACTTTATTCTCTCACCTAATAAAATGTTCTGTGCTGGTTTCTTTCAAGTTGGCGAAAATGCCTTCTCCTTCGCCATATGGTTCAACGAACCTGACACTCACAACCCCACCACTGTGGTTTGGATGGCAAGCCGTGATCAACCCGTAAATGGGAAGCTCTCAAAGCTTTCTCTTTTGAACAGTGGTAACATCGTCTTGGTTGATGCTGGCCAAATCACCACTTGGTCATCAAACACAGCTTCACATGCCCCAGTAAAGTTGCATCTCCAAGATGATGGTAATCTTGTGCTAGATGATCCCCAAGGAACCATTTTGTGGAAAAGTTTTGATTTTCCAACGGATACTCTGCTTCCTGGTCAACCTCTTACCAGATACACGCAACTTGTGTCTTCAAGAAGCGAGAGTAACCATTCATCTGGTTTCTACAAGTTTTTCTTCGATGATGACAACGTTCTCGGTCTTCAGTATGATGGTCCTGATGTTTCAAGCTCCTACTGGCCACAACCTTGGTTGATAAGTTGGGATGCTGGAAGGACTAATTTCAACAGTAGTAGAATTGGCGTGTTGAATTCTCTGGGACTTTTCAGTTCAACAGATAATTTCAGTTTCGTGACATCTGATTATGGCACAGTGCTGCAGAGAAGGTTGAAAGTGGAGTGTGATGGCAATGTTCGGGTGTACAGTCGAAATAATGTTTTGCAGAATTGGTATGTTTCATGGCAAGCAATTTCTAGTGGTTGCGTACCTCACGGGATTTGTGGACCCAACAGCTTCTGTGTTTATGTTCATGCGAGTGGAAGAAAATGTTTGTGTCTTCCGGGGCATAGATTGAAGAATCACAGTGATTGGTCTCAAGGGTGTGAACCCTTGTTTCAGCTTACCTGCCATAGGAATGAGTCTATGTTCTTGGAGATTCCAAATGTTGAGTTTTACGGCTATGACAATCATTATGTAGAAATCAGTAACTACAGTGCCTGTGAGAGTTTATGCTTGCAAGACTGCAGTTGTAAGGGGTTTCAACACTCCTATAGTGATGATAAACGCTTTTATAGGTGCTATACGAAAACGCAATTTCTCAATGGAAGACGTTCACAAGTATTCCAAGGAACAACATACCTGAGATTGCCCAGAAGTAATAGCTTCTCTCACAAAGAACATGACAGAGAATCTTTAAATGATCATGTTTGTTCAGTTCAACTTCAACGTGCTTATATCAAAACACAAGCAAACCATTATGTGAAGATTTTCCTGTGGTTTTCCATCACCCTTGGAGCTTTTGAAGTGATTTGTATTGTTTTGATTTGGTGTCTGGTTAGGACCAGACAAAAGTCTAATCGAGAGGGCTACCATCTTGCAGGAACAGGATTCAGAAAATATAGTTATTCAGAGTTGAAGAAGGCGACAAAGGGGTTCAGTGAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGTATTTTATCAGATGAAAGACATGCAGCAATCAAGAGACTGAATGAGGCTAAACAAGGAGAAGGAGAATTCCTTGCTGAAGCGAGTCTCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGATTGTTGGTGTATGAGTACATGGAGAAGGGTTCTTTGGCGGAAAATCTCTCATCCAACACTCTTGATTGGAGTAAGAGATTCAACATTGCCCTTGGAACAGCAAGAGTTCTGGCATATCTGCATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAGAATATACTTCTTGATGCTAATTATCAACCGAAGGTAGCAGATTTTGGCCTGTCGAAGCTACAAAACAGGAACAACTTGAACAATTCAAGTTTTTCAATGATAAGAGGAACAAGAGGGTACATGGCACCTGAGTGGGTTCTGAACTTAGCAATAACGTCGAAGGTTGATGTTTACAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAAGAGCCCAACAACGGGTGTTCAAAACATTGATGGAGAAGAGTCGTACAATGGAAGGGTGGTGGCATGGGTGAGAGAAAAAAAGAGTGGAAGATCTTGGCTACAGCATATCATTGATCCTGCACTCCAAACTAACTATAATGAATCCAAGATGGAGCTTTTAGCCAAAGTTGCTTTGGACTGTGTTGAGGAAGACAAAGATATAAGGCCAACCATGAGCCAAGTCGTTGAAATGCTTCAGAGTGTTCCTTAG 2355 0.4208 MGFSISLFFLLLPLSFQFSSSLFSLIKGSSLSVEKQAHDFILSPNKMFCAGFFQVGENAFSFAIWFNEPDTHNPTTVVWMASRDQPVNGKLSKLSLLNSGNIVLVDAGQITTWSSNTASHAPVKLHLQDDGNLVLDDPQGTILWKSFDFPTDTLLPGQPLTRYTQLVSSRSESNHSSGFYKFFFDDDNVLGLQYDGPDVSSSYWPQPWLISWDAGRTNFNSSRIGVLNSLGLFSSTDNFSFVTSDYGTVLQRRLKVECDGNVRVYSRNNVLQNWYVSWQAISSGCVPHGICGPNSFCVYVHASGRKCLCLPGHRLKNHSDWSQGCEPLFQLTCHRNESMFLEIPNVEFYGYDNHYVEISNYSACESLCLQDCSCKGFQHSYSDDKRFYRCYTKTQFLNGRRSQVFQGTTYLRLPRSNSFSHKEHDRESLNDHVCSVQLQRAYIKTQANHYVKIFLWFSITLGAFEVICIVLIWCLVRTRQKSNREGYHLAGTGFRKYSYSELKKATKGFSEEIGRGAGGVVYKGILSDERHAAIKRLNEAKQGEGEFLAEASLIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEKGSLAENLSSNTLDWSKRFNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLQNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVVLEMITGKSPTTGVQNIDGEESYNGRVVAWVREKKSGRSWLQHIIDPALQTNYNESKMELLAKVALDCVEEDKDIRPTMSQVVEMLQSVP 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01677 784 PIRSF SRK 1 784 IPR024171 GO:0004674
Viun5g01677 784 Pfam D-mannose binding lectin 76 162 IPR001480 -
Viun5g01677 784 SUPERFAMILY Protein kinase-like (PK-like) 487 780 IPR011009 -
Viun5g01677 784 Gene3D Phosphorylase Kinase; domain 1 473 581 - -
Viun5g01677 784 Gene3D Transferase(Phosphotransferase) domain 1 582 784 - -
Viun5g01677 784 FunFam Serine/threonine-protein kinase 582 784 - -
Viun5g01677 784 CDD B_lectin 40 150 IPR001480 -
Viun5g01677 784 ProSiteProfiles PAN/Apple domain profile. 333 417 IPR003609 -
Viun5g01677 784 Pfam PAN-like domain 333 395 IPR003609 -
Viun5g01677 784 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01677 784 SMART blect_4 32 150 IPR001480 -
Viun5g01677 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Viun5g01677 784 ProSiteProfiles Bulb-type lectin domain profile. 16 148 IPR001480 -
Viun5g01677 784 ProSitePatterns Protein kinases ATP-binding region signature. 513 535 IPR017441 GO:0005524
Viun5g01677 784 PANTHER OS07G0415500 PROTEIN 4 782 - -
Viun5g01677 784 CDD PAN_AP_plant 329 414 - -
Viun5g01677 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 166 IPR036426 -
Viun5g01677 784 CDD STKc_IRAK 513 781 - -
Viun5g01677 784 Pfam S-locus glycoprotein domain 238 316 IPR000858 GO:0048544
Viun5g01677 784 FunFam S-receptor-like serine/threonine-protein kinase 476 581 - -
Viun5g01677 784 FunFam Putative receptor protein kinase ZmPK1 19 149 - -
Viun5g01677 784 Pfam Protein kinase domain 510 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01677 784 SMART serkin_6 507 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01677 784 Gene3D Hepatocyte Growth Factor 339 422 - -
Viun5g01677 784 Gene3D - 25 148 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01677 Viun-Chr5 14565611 14568238 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01677 497 783 Trihelix Transcription Factor Family AT5G38560 40.878 3.03e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun5g01677 Pkinase 5.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01677 - - gmx:100784287 1168.68