Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01674 ATGAACTTGAACATGGCTTCCTCAATCTTACTCTTTCTTTTCCTGCAATTTTTCTCTCTGCACACTTCACATTCTGCATTTTCATCACTAACCACGGACTCATTCCTCTCCGTAGAGAAACCCGAAGACGTTATTCTCTCCCCAAACGGCGTTTTCTCCGCCGGCTTCGTTGCCGTCGGTGAAAACGTCTACTCCTTCGCCGTATTCTTCACACAACCCCGTTCCCACAACCAACCCACAATCGTGTGGATGGCGAACCGCGAGAATCCCGTCAATGGAAAACGTTCCAAATTCTCTCTCTCAAGAACCGGTAACCTTGTTTTGGATGATGCTGCTCAACGAACGGTGTGGTCTTCGAACACTGTTTCATTGGCTTCACCACTGTTGAAGCTCAACGACAATGGCAATCTGGTTTTGCGTGACCTCCAAGGAACCGTTCTGTGGCAAAGCTTTGATTTTCCCACCGATACTCTTCTTCCGGGACAGCCCCTCACGAGACGAACGCAACTCGTGTCTGCAAGAAGCGACACTAACCATTCCTCCGGTTTCTACAAGCTCTTCTTCGACGATGATAACGTTCTTCGTCTTCTCTACGATGGCCCTGATGTTTCCAGCATTTACTGGCCATATCCATGGTTGGTGAGTTGGGACGCTGGAAGGTCTACTTACAATAGCAGTAGATTCGCGGCGTTGGACTCACTCGGAAGATTCATTTCTTCTGATAGTTTTACTTTCATCACATCTGATTATGGCGCTACGAAGCAGAGAAGATTGAAACTTGACTCTGATGGTAACCTTAGAGTGTACACGCTGCATGATGAATGGTTTGTTTCGTGGCACGCGAGAGCTGACACTTGCAATATCCACGGGATTTGTGGAGCTAACAGTGCGTGCAGTTATGATCATGAGCATGGAAGGAAGTGCTCGTGTCTTCCGGGACATAGAGTGAAGAACCATAGCGATTGGTCTTATGGCTGTGAACCTGTGTTCGTTTTGTCTTGCAATAGAAGTGAGTCTACCTTCTTGGAGTTGCTGGGTGTTGAGATTTATGGTTATGATGCTAACTTTTCTGAAGCTAATAGCTATAGCTATTGTAGGAATCTGTGCTTAGAAGACTGTAACTGTAAGGGGTTTCAGTACTCATACAATGACGGCAAGAACGTTTACAATTGCTACACAAAGATGCAATTGCTTAACGGCCGCCGAACACCCAGTTTCAAAGGAACAATATACGTGAAAGTGCCTAAAAATCATAGCCTTTTCAGGGAAGAATCTTTTCGTTCAGATGCGCATGTTTGTGCTGTTAAAATTCCCAGAGTGTATGACAAATATCATGTGAACAAGATTGTGAGGTTTTTTCTTTGGGTGGCCATAGTAATTGGTGCTATTGAATCGGTCTGCGTGTTTGTCGTGTGGGTTTTCGTAGTTAAGACGCGCCGAAAGTCTCATGCAGATGAACACGATTACCATCCACTGACCGATAGATTCAGAAAATTTAGTTATTCAGAGTTGAAGAAAGCCACAAAGGGGTTCAGTGAAGAGATTGGAAGGGGTGCAGGAGGGGTTGTGTACAAAGGTATTTTATCAGATGAAAGACATGCAGCAATCAAGAGACTGAATGAGGCTAAACAAGGAGAAGGAGAATTCCTTGCTGAAGTGAGTCTCATTGGAAGGCTTAACCACATGAACTTGATTGAAATGTGGGGATATTGTGCTGAGGGAAAGCATAGGTTGTTGGTGTATGAGTACATGGAGAAGGGTTCTTTGGCGGAAAATCTCTCATCCAACACTCTTGATTGGAGTAAGAGATACAACATTGCCCTTGGAACAGCAAGAGTTCTGGCATATCTGCATGAAGAATGCTTGGAGTGGATATTGCACTGTGATATAAAGCCACAGAACATACTTCTTGATGCTAATTATCAACCGAAGGTAGCAGATTTTGGCCTGTCGAAGCTACAAAACAGGAACAACTTGAACAATTCAAGTTTTTCAATGATAAGAGGAACAAGAGGGTACATGGCACCTGAGTGGGTTCTGAACTTAGCAATAACGTCGAAGGTTGATGTTTACAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAAGAGCCCAACAACGGGTGTTCAAAACATTGATGGAGAAGAGTCGTACAATGGAAGGGTGGTGGCATGGGTGAGAGAAAAAAAGAGTGGAAGATCTTGGCTACAGCATATCATTGATCCTGCACTCCAAACTAACTATAATGAATCCAAGATGGAGCTTTTAGCCAAAGTTGCTTTGGACTGTGTTGAGGAAGACAAAGATATAAGGCCAACCATGAGCCAAGTCGTTGAAATGCTTCAGAGTGTTCCTTAG 2361 0.4426 MNLNMASSILLFLFLQFFSLHTSHSAFSSLTTDSFLSVEKPEDVILSPNGVFSAGFVAVGENVYSFAVFFTQPRSHNQPTIVWMANRENPVNGKRSKFSLSRTGNLVLDDAAQRTVWSSNTVSLASPLLKLNDNGNLVLRDLQGTVLWQSFDFPTDTLLPGQPLTRRTQLVSARSDTNHSSGFYKLFFDDDNVLRLLYDGPDVSSIYWPYPWLVSWDAGRSTYNSSRFAALDSLGRFISSDSFTFITSDYGATKQRRLKLDSDGNLRVYTLHDEWFVSWHARADTCNIHGICGANSACSYDHEHGRKCSCLPGHRVKNHSDWSYGCEPVFVLSCNRSESTFLELLGVEIYGYDANFSEANSYSYCRNLCLEDCNCKGFQYSYNDGKNVYNCYTKMQLLNGRRTPSFKGTIYVKVPKNHSLFREESFRSDAHVCAVKIPRVYDKYHVNKIVRFFLWVAIVIGAIESVCVFVVWVFVVKTRRKSHADEHDYHPLTDRFRKFSYSELKKATKGFSEEIGRGAGGVVYKGILSDERHAAIKRLNEAKQGEGEFLAEVSLIGRLNHMNLIEMWGYCAEGKHRLLVYEYMEKGSLAENLSSNTLDWSKRYNIALGTARVLAYLHEECLEWILHCDIKPQNILLDANYQPKVADFGLSKLQNRNNLNNSSFSMIRGTRGYMAPEWVLNLAITSKVDVYSYGIVVLEMITGKSPTTGVQNIDGEESYNGRVVAWVREKKSGRSWLQHIIDPALQTNYNESKMELLAKVALDCVEEDKDIRPTMSQVVEMLQSVP 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01674 786 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Viun5g01674 786 Pfam D-mannose binding lectin 80 168 IPR001480 -
Viun5g01674 786 Pfam Protein kinase domain 512 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01674 786 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 211 IPR036426 -
Viun5g01674 786 CDD B_lectin 45 154 IPR001480 -
Viun5g01674 786 CDD STKc_IRAK 515 783 - -
Viun5g01674 786 Gene3D - 153 278 IPR036426 -
Viun5g01674 786 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524
Viun5g01674 786 Pfam S-locus glycoprotein domain 242 317 IPR000858 GO:0048544
Viun5g01674 786 FunFam S-receptor-like serine/threonine-protein kinase 478 583 - -
Viun5g01674 786 PIRSF SRK 1 786 IPR024171 GO:0004674
Viun5g01674 786 SUPERFAMILY Protein kinase-like (PK-like) 487 782 IPR011009 -
Viun5g01674 786 Gene3D Hepatocyte Growth Factor 343 412 - -
Viun5g01674 786 Gene3D Transferase(Phosphotransferase) domain 1 584 786 - -
Viun5g01674 786 FunFam Serine/threonine-protein kinase 584 786 - -
Viun5g01674 786 SMART serkin_6 509 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01674 786 PANTHER OS07G0415500 PROTEIN 3 784 - -
Viun5g01674 786 Gene3D Phosphorylase Kinase; domain 1 473 583 - -
Viun5g01674 786 Gene3D - 25 152 IPR036426 -
Viun5g01674 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Viun5g01674 786 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Viun5g01674 786 ProSiteProfiles Protein kinase domain profile. 509 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01674 786 CDD PAN_AP_plant 330 415 - -
Viun5g01674 786 SMART blect_4 33 154 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01674 Viun-Chr5 14474894 14477394 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01674 499 785 Trihelix Transcription Factor Family AT5G38560 41.554 4.04e-64 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Viun5g01674 Pkinase 1.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01674 - - gmx:100784287 1124.77