Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01673 ATGAGTTGCTTTTCATGTTTTTCATCAAGTAAAGCAGCCAAACATTCTAACAATGGAAAGAAGGTACATCAGCCTGCTTCTCATTCTCCTAAAGAATCAGCTCACTCCCAAAAAGAGAATCACAATAGCAAGGCAAAGACAAACCATCAAACAGAACCTAAAATAAACAAGGAGGTCAATAAAGATAACGGGAACCACAATATTGCTGCTCAAACCTTCACCTTCAGGGAATTGGCTAATATCACAAAGAATTTCAGGCAAGAATGCCTAATAGGAGAAGGTGGTTTTGGGAGGGTTTACAAAGGAAAACTTGAAAAAACCAACCAGGAAGTAGCTGTGAAGCAACTTGACAGGAATGGATTACAAGGAAACAGAGAATTTCTTGTTGAAGTTCTAATGTTGAGTCTTTTGCACCATAAAAATCTGGTGAATCTAATTGGATATTGTGCTGATGGAGATCAAAGATTATTGGTCTATGAGTACATGCCATTGGGATCCCTTGAGGACCATCTTCTTGATCTTGATCCACGACAAAAGCCTCTAGAATGGTTCCACAGAATGAAAATAGCTTTGGATGCTGCAAAAGGTCTAGAATATTTGCACGACAAAGCCAATCCTCCAGTGATCTACCGTGACTTGAAATCATCAAACATCTTATTGGACAGAGAATTCAATGCAAAACTCTCCGATTTTGGACTTGCAAAGTTGGGTCCTACAGGAGACAAATCTCATGTATCTTCAAGAGTAATGGGTACTTACGGATACTGTGCTCCGGAATATCAAAGAACTGGTCAGCTAACTGTAAAATCAGACGTATACAGCTTTGGAGTAGTTTTGCTTGAATTGATCACCGGAAGGAGAGCCATTGACAACACAAGAAAAGCGCAAGAGCAAAATCTCGTTAATTGGGCACATCCAATATTCAAGGAGGCAAACAGATACTCAGAATTAGCAGACCCAGTTCTTGAAGGAAAGGTTCCAGTGAGATCCTTGAACCAAGCAGTGGCAGTAGCAGCCATGTGTTTGAACGAGGAGCCATCAGTGAGACCTTTGATCAGTGATGTTGTGACTGCCCTTAGTTTTCTTGGGACACCCCCAAAGGGTGAAGAGGTCCCAGGAGCATCTCCTGTTCCCATGCCCTCCCCATCACACGATCAACAACAACAACCCACCAATGCCTCTTCCAATCTTCTTGATCAAGACATCGCTGCCATCGAACGCCAAAGAGCAGTTGCTGAAGCCATCGAATGGGGCAACAATTCTAGGAACAAAGCACCGCACCGTCAAACTCCTCCATCTTTGTAA 1305 0.4245 MSCFSCFSSSKAAKHSNNGKKVHQPASHSPKESAHSQKENHNSKAKTNHQTEPKINKEVNKDNGNHNIAAQTFTFRELANITKNFRQECLIGEGGFGRVYKGKLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHKNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLDPRQKPLEWFHRMKIALDAAKGLEYLHDKANPPVIYRDLKSSNILLDREFNAKLSDFGLAKLGPTGDKSHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRKAQEQNLVNWAHPIFKEANRYSELADPVLEGKVPVRSLNQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTPPKGEEVPGASPVPMPSPSHDQQQQPTNASSNLLDQDIAAIERQRAVAEAIEWGNNSRNKAPHRQTPPSL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01673 434 SMART serkin_6 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01673 434 MobiDBLite consensus disorder prediction 380 401 - -
Viun5g01673 434 MobiDBLite consensus disorder prediction 366 403 - -
Viun5g01673 434 MobiDBLite consensus disorder prediction 1 63 - -
Viun5g01673 434 FunFam Serine/threonine-protein kinase PBS1 57 161 - -
Viun5g01673 434 MobiDBLite consensus disorder prediction 25 61 - -
Viun5g01673 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Viun5g01673 434 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Viun5g01673 434 SUPERFAMILY Protein kinase-like (PK-like) 69 390 IPR011009 -
Viun5g01673 434 PANTHER OS07G0668900 PROTEIN 3 368 - -
Viun5g01673 434 MobiDBLite consensus disorder prediction 1 24 - -
Viun5g01673 434 Pfam Protein kinase domain 87 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01673 434 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Viun5g01673 434 CDD STKc_IRAK 91 359 - -
Viun5g01673 434 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01673 434 Gene3D Phosphorylase Kinase; domain 1 54 161 - -
Viun5g01673 434 FunFam Serine/threonine-protein kinase PBS1 162 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01673 Viun-Chr5 14463689 14466547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01673 1 422 Glycoside Hydrolase AT3G07070 67.674 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Viun5g01673 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01673 - - gmx:100786405 674.855