Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01649 ATGTTAGGTACCAACACTGGTAAGGATCCTAGCATGTTTCCTCAACATGCCCAACAAGACCTATCTAGTAGTGTTTCAAATACAGGGCGTCATGTGCAAAATAATATCACTATGCTGGCAGGGGAAGAATTTTACGCGAATGTTGGTCGTGATGGAATTGCTGCTGGAAAGGTTCTTGTTTCACCAGATATACCTCGAAATCATGAGAATGTGTTTGGTTTGAATAGAGAGAATCGCAATGTGAGATATGAAGATCTTACTAATATTTTGGGGCTGAGGAGAATGGACTCTCAGAATTCTTCTGATATATCTGACTTTGTATCTTTGAAACAGTCAGTACATGAGATGGAAAATGGAGCTTCTGTAAACATTTCAAACAAAATTCAAAAGGGTGATGGTATGTTGAGGAAGGCTGTTCAAGAACCAGTGGGTGACCAGTCTGGTCTCGCAGTTGTATCACCACTTTGTAGATATGAAGCTTCTCAGTCCAATGTATTTTCTGGTTCAGGAGTTGTAGACGATTTTTTGTCTGGGAAAGTGAAGTTTCTGTGCAGTTTTGGTGGAAAAATATTACCAAGACCCAGTGATGGGAAACTCAGGTATGTAGGGGGAGATACCCACATCATATCTATCCCAAAGGATATTTCGTGGCAAGAGCTTATGAAGAAGACCTTGGGTATTTGCAATCAACCTCACACAATAAAGTACCAGCTTCCAGGAGAGGATCTTGATGCTCTAATATCTGTTTCCTCTGATGAAGATCTTCAAAATATGAAAGAGGAGTACCATGGACTTGAAAGGCATGAACGTTCTCAAAAACTCAGAATTTTTTTAGTTCCTTTGTGTGAATCTGAAGAGACATCATCAACAGAGGTGAGTGCTGTTCAGCAGAGTGATCCTGATTACCAATATGTTGTTGCTGTAAATGGAATGGGAGACTCTACTCGAACAAACATTGGTGGGCAAAATTTGACAAATGAATCCAGTCAGTTGGGGACAGATTTGAACTTTACTCCAGTTCTCCAAAAAACACCAAATGCTTCTCCTTTGGAGATCAGGGATGGTATTAATGCTTTAAATCCAGATGGGCTTTTTAATGATTCCCTGAGTTTGCAAAGGCCTTTGTCAATTCCTCCTGCTCCAATTCCGGTAGCAGGTTCTAACACAGGTTATATACAATTACTGGGTGACCACTCATGTCAGGGTAGCATTGAGAGCAATGCATCTTATGCTACTACAAAGCTACATCCTGAGTACTCTAATATAAGAACTATTGGTTGCATATATCCTCAGCACGTGAGTGACACTTGTTCTTATCAGGGTGGTGATGTTGGTCAGCCCAAGAAGCTCAATGGAGGTCATTTAGACTACAATCCTAGCAAGGAATTAGTCACTCCTGTATATGTTAATCCCAGAGATGAATTTTTTGGTGGAAGGTCCTTGCAAAGGGAAAGGGTCTACTCTAAAACTCCTCTTTCATTCTTGGATGATGTAATTTGTCAACAGGGTGAATCTTATGGAACTACAGACTCCCCTCATGGGATACCCCATGCTTTTTCTGATCCACAATTGCTAGAGACTGGAGCAAGGTCTGATTGTTGCTCCCAAAATGGATATGGTCAATCTTTCTCCCTGAACCTTGAAAAGGGTCAAATATCTTCATTGTTAATCCCTAGTGTCTCACGGGTGAATGTCATGGAGCATCAGCATGATTCTTTTGTCCATCATCCTCATATACAAAGTACAACACCAAAAGAGGAGTCAGCTCATGCACCCAAAAGACAAGATTTGACATCTCCATACTATGAATCCATGGGAATGAATAATCTTGTTCACATGGATAACACATTAGCTGAAAGAAAGAACTCAATTGCTCAAACAGACTTGGGGATACCCAGCTACGATGCAAAGGATGTTAAGGAAAATTCTGTGAAATTAGAAAGGATGAAGATAATTGAACAAAAGAATTGTATTCCCAAGGATAGCAATGGTCAGCAGGGGAAATCATTTGCTATTGACAAGCGATTTGTGGCTGAGTTGCATCTCTTGGACTCCTTCCCTGCTAATAACTTAAATGCTGATATTAATACGCAAAAGAATAGGGATCTACCTTTTGAGGGTATTGTCCCTATTCCATCAGATACGATGGATCTCTCCTTAAATAATTATGCTGAAAAGACCACATGTGATTCTAACATGAGCGAAAGGACTAGTGAGCACAAAATCAACGCTTTGGCTAAAGGTCTGAATGGTGAACAAGGGTTTGATTTTTCATGGACCAGAAATTTTGACTTAAATGCTCCAATTTTAAATTCTGAAGTAGGCTCTAGTGATAAAAGTTCCCGAGGAGATCATACTTATAAGTTGACCATTCATCCAGCTTCTCATAAAGCTGCACAAATTCATCCTTCAAAGAATCATATGGCTATAGCTTTTCAAGAAAATCCTACAATATGCTATGGAAGTTTGTATCCTGCTGCATTTTGTGATGAGCTTGATCCAAGTGTAAACATGCCTATGAATGACCCTGATAACTCAAGCAATATTATGCCACTTAAAAAGGCACCACCTTTGCATGATGACTTCATTACCAGCACTGGTCAAATGGTGGATCAGTTCATCCCCAAACACTCTGCCTCTGGAATGTCAAATGTTGAAGATAAAGTTTCAGAACAACAAAATATTTTAGAAGGCTACACTAATGTGAATCAAGTGGAGTCGTTCAATGTAGCAGACATGACTCGTGTTGTTCATCCTTATATTTTTAGTAATATTGGAAGTGTTGTTATATCCCCATCTCATACAGAAGCTGGGAGCATCATCCCTGAGTCTGAGCCTGAGGATTTTAATGAAGACAAAAATGAATTGTTTTCTGATGCAATGATAGCAGAAATGGAGGCTAGCAATTATGGTTTACAGATAATAAGGAATGCTGATCTTGAAGAACTTACAGAGTTGGGTTCTGGTACTTATGGCACTGTTTATCATGGAAAATGGCGGGGAACAGATATTGCTATAAAGAGAATTAAAAAGAGTTGCTTTGCCGGAAGGTCTTCTGAGCAAGAACGGTTGGCAAAAGATTTTTGGAGAGAAGCACAAATCCTTTCAAATCTTCACCATCCCAATGTGGTTGCATTTTATGGAATAGTACCGGATGGGGCTGAAGGAACCTTAGCAACTGTAACAGAATACATGGTTAATGGTTCCCTTAGGCATGTCCTTGTAAAGAACAATAGATTACTTGATCGCCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGTATGGAATATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTGCTTGTGAATCTAAGGGATCCACAACGACCAATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTTGTATCTGGAGGTGTGCGAGGAACCCTTCCATGGATGGCACCAGAGCTGTTGAATGGGAATAGCAGTCGTGTTTCTGAAAAGGTTGACGTTTTCTCATTTGGCATCTCAATGTGGGAGTTATTAACAGGAGAGGAACCTTATGCAGATATGCATTGTGGCGCCATTATTGGGGGTATTGTAAAGAACACTCTTAGACCTCCTGTGCCTGAACGGTGTGATTCTGGATGGAGGAAGCTTATGGAAGAGTGTTGGTCACCGGATCCCGAAAGCCGGCCATCATTCACAGAGATAACCAGCAGGTTAAGATCCATGTCTCTACTCCTTCAAACAAAAGGGAATTATCAGTTAAGACCCTTCTGA 3786 0.401 MLGTNTGKDPSMFPQHAQQDLSSSVSNTGRHVQNNITMLAGEEFYANVGRDGIAAGKVLVSPDIPRNHENVFGLNRENRNVRYEDLTNILGLRRMDSQNSSDISDFVSLKQSVHEMENGASVNISNKIQKGDGMLRKAVQEPVGDQSGLAVVSPLCRYEASQSNVFSGSGVVDDFLSGKVKFLCSFGGKILPRPSDGKLRYVGGDTHIISIPKDISWQELMKKTLGICNQPHTIKYQLPGEDLDALISVSSDEDLQNMKEEYHGLERHERSQKLRIFLVPLCESEETSSTEVSAVQQSDPDYQYVVAVNGMGDSTRTNIGGQNLTNESSQLGTDLNFTPVLQKTPNASPLEIRDGINALNPDGLFNDSLSLQRPLSIPPAPIPVAGSNTGYIQLLGDHSCQGSIESNASYATTKLHPEYSNIRTIGCIYPQHVSDTCSYQGGDVGQPKKLNGGHLDYNPSKELVTPVYVNPRDEFFGGRSLQRERVYSKTPLSFLDDVICQQGESYGTTDSPHGIPHAFSDPQLLETGARSDCCSQNGYGQSFSLNLEKGQISSLLIPSVSRVNVMEHQHDSFVHHPHIQSTTPKEESAHAPKRQDLTSPYYESMGMNNLVHMDNTLAERKNSIAQTDLGIPSYDAKDVKENSVKLERMKIIEQKNCIPKDSNGQQGKSFAIDKRFVAELHLLDSFPANNLNADINTQKNRDLPFEGIVPIPSDTMDLSLNNYAEKTTCDSNMSERTSEHKINALAKGLNGEQGFDFSWTRNFDLNAPILNSEVGSSDKSSRGDHTYKLTIHPASHKAAQIHPSKNHMAIAFQENPTICYGSLYPAAFCDELDPSVNMPMNDPDNSSNIMPLKKAPPLHDDFITSTGQMVDQFIPKHSASGMSNVEDKVSEQQNILEGYTNVNQVESFNVADMTRVVHPYIFSNIGSVVISPSHTEAGSIIPESEPEDFNEDKNELFSDAMIAEMEASNYGLQIIRNADLEELTELGSGTYGTVYHGKWRGTDIAIKRIKKSCFAGRSSEQERLAKDFWREAQILSNLHHPNVVAFYGIVPDGAEGTLATVTEYMVNGSLRHVLVKNNRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGNSSRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPERCDSGWRKLMEECWSPDPESRPSFTEITSRLRSMSLLLQTKGNYQLRPF 1261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01649 1261 MobiDBLite consensus disorder prediction 1 28 - -
Viun5g01649 1261 PANTHER SERINE-THREONINE PROTEIN KINASE 224 1245 - -
Viun5g01649 1261 CDD PB1_UP2 183 278 - -
Viun5g01649 1261 SMART PB1_new 194 281 IPR000270 GO:0005515
Viun5g01649 1261 Pfam PB1 domain 196 280 IPR000270 GO:0005515
Viun5g01649 1261 Gene3D - 198 280 - -
Viun5g01649 1261 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 199 281 - -
Viun5g01649 1261 PRINTS Tyrosine kinase catalytic domain signature 1214 1236 IPR001245 GO:0004672|GO:0006468
Viun5g01649 1261 PRINTS Tyrosine kinase catalytic domain signature 1062 1075 IPR001245 GO:0004672|GO:0006468
Viun5g01649 1261 PRINTS Tyrosine kinase catalytic domain signature 1170 1192 IPR001245 GO:0004672|GO:0006468
Viun5g01649 1261 PRINTS Tyrosine kinase catalytic domain signature 1099 1117 IPR001245 GO:0004672|GO:0006468
Viun5g01649 1261 SUPERFAMILY Protein kinase-like (PK-like) 969 1242 IPR011009 -
Viun5g01649 1261 ProSitePatterns Protein kinases ATP-binding region signature. 986 1011 IPR017441 GO:0005524
Viun5g01649 1261 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1105 1117 IPR008271 GO:0004672|GO:0006468
Viun5g01649 1261 ProSiteProfiles Protein kinase domain profile. 980 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01649 1261 Gene3D Phosphorylase Kinase; domain 1 973 1067 - -
Viun5g01649 1261 CDD STKc_MAP3K-like 986 1243 - -
Viun5g01649 1261 SUPERFAMILY CAD & PB1 domains 195 280 - -
Viun5g01649 1261 Pfam Protein tyrosine and serine/threonine kinase 983 1243 IPR001245 GO:0004672|GO:0006468
Viun5g01649 1261 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1068 1259 - -
Viun5g01649 1261 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 973 1067 - -
Viun5g01649 1261 Gene3D Transferase(Phosphotransferase) domain 1 1068 1257 - -
Viun5g01649 1261 SMART serkin_6 980 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01649 Viun-Chr5 14218161 14239373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01649 176 436 MAP Kinase Kinase Kinase AT1G16270 42.652 2.78e-44 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Viun5g01649 PK_Tyr_Ser-Thr 5.5e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01649 - - pvu:PHAVU_008G122700g 2102.41