Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01639 ATGGCGTTTCTCAAGTCTTTCTCTCTCTACATTTCCATGTCCTTGGTCTTCTTCCTCTTCTTTTGCTTCTGCAAAGCCAGTACTACCGCCACAAAGTCATTGTCCCCTTCACCCTCCACTTCCTCTGATGTTGAACTTCTCTTGGGAAAAATCAAAGCTTCACTGCAAGGTAACTCTGACAACCTTGTTTTGTCTTCATGGAACTCCTCTATCCCACTTTGTCAGTGGAGAGGCCTCAAGTGGGTGTTCTCCAGCGGCACTCCTCTTTCATGCACTGACTTGTCTTCTCCACAATCTACCAACCTTACACTCCACAAGGACCCTTCTCTTCACTTGCTTTCTCTTCAGCTCCCATCAGCAAATCTCTCTGGTTCCCTCCCCAGAGAGCTTGGGGGCTTCCCTATGCTTCAAAGTCTTTACCTTAACATAAATTCATTGCAGGGAACCATCCCTCTTGAGCTTGGCTACAGCTCCTCCCTCTCTGACATTGATTTGAGTGACAATATGCTAAGTGGGGTTCTTCCTCCATCCATTTGGAACTTGTGTGACAGGCTTGTTTCCCTTAGGCTCCATGGTAATTCACTATCTGGGTCTGTTTCTGAGCCTGCATTGCCCAACTCATCCTGCAAGAATTTGCAGTTGCTTGATTTAGGAGGCAATAACTTTTCTGGGAGTTTCCCTGAGTTCATGACAAAGTTTGGTGGGCTAAAGCAGCTTGACCTGGGGAACAACTTGTTTATGGGTACAATTCCTCAGAGCCTTACTGGGCTGAGGCTTGAAAAATTGAATCTTTCCCACAATAACTTCAGTGGGGTTTTGCCTTTCTTTGGAGAATCCAAGTTTGGTGTGGATGCTTTTGAGGGGAATAGCCCTGGTTTATGTGGACCACCTTTGGCAAGCTGTGCTAGGACCTCTACACTGAGTTCTGGTGCAGTTGCTGGCATTGTTATTAGTCTTATGACAGGAGCTGTGGTTTTGGCCTCTTTGCTGATTGGGTATATGCAGAACAAGAAGAGGAAGGGGAGTGGAGAGAGTGAAGATGAGTTGAATGAGGAAGAGGAAGATGAAGAGAATGGTGGTAATGCTATTTGTGGAGCTGGTGAAGGGAAGCTTATGTTGTTCCCTGGAGGTGAGAATTTGACATTGGATGATGTGTTGAATGCAACTGGGCAAGTTTTGGAGAAGACTTGTTATGGGACAGCTTATAAGGCTAAGCTTGCTGATGGAGGCACCATTGCTTTGAGGTTGTTGCGAGAAGGTAGCTGCAAAGATAGGGCTTCATGTTTGTCGGTTATAAAGCAATTGGGAAAAATTCGCCATGAGAATTTGATTCCTTTGAGAGCTTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATCTATGACTATCTGCCTCTCAGAACACTTCATGATCTTTTACATGAAGCTAAAGCCGGAAAACCAGTACTGAACTGGGCCAGAAGACACAAGATTGCATTAGGCATAGCGAGAGGACTAGCCTATCTTCACACAGGACTAGAAGTTCCAATCACTCATGCAAATGTGAAGTCGAAGAATGTGCTTGTGGATGACTTCTTTGCAGCAAGGCTAACTGATTTTGGGCTGGACAAGCTGATGATTCCTTCCATAGCAGACGAAATGGTGGCGCAGGCGAAGACCGACGGCTACAAGGCGCCGGAGCTTCAAAGAATGAAGAAATGCAGCTCCAGGACTGATGTGTATGCTTTTGGCATACTCCTGCTTGAAATCTTGATTGGGAAGAAGCCTGGGAAGAATGGAAGAAGTGGTGAGTATGTGGACTTGCCCTCAATGGTGAAGGTGGCAGTTTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAACTGTTGAAAGGGATAAGAAGTCCCATGGAAGATGGGTTGGTGCAGGCACTGAAGCTGGCAATGGGGTGCTGTGCACCAGTGGCATCTGTGAGGCCAAGCATGGAGGAAGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAACAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGCAGTGTTACACCATTTTAA 2064 0.4641 MAFLKSFSLYISMSLVFFLFFCFCKASTTATKSLSPSPSTSSDVELLLGKIKASLQGNSDNLVLSSWNSSIPLCQWRGLKWVFSSGTPLSCTDLSSPQSTNLTLHKDPSLHLLSLQLPSANLSGSLPRELGGFPMLQSLYLNINSLQGTIPLELGYSSSLSDIDLSDNMLSGVLPPSIWNLCDRLVSLRLHGNSLSGSVSEPALPNSSCKNLQLLDLGGNNFSGSFPEFMTKFGGLKQLDLGNNLFMGTIPQSLTGLRLEKLNLSHNNFSGVLPFFGESKFGVDAFEGNSPGLCGPPLASCARTSTLSSGAVAGIVISLMTGAVVLASLLIGYMQNKKRKGSGESEDELNEEEEDEENGGNAICGAGEGKLMLFPGGENLTLDDVLNATGQVLEKTCYGTAYKAKLADGGTIALRLLREGSCKDRASCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHEAKAGKPVLNWARRHKIALGIARGLAYLHTGLEVPITHANVKSKNVLVDDFFAARLTDFGLDKLMIPSIADEMVAQAKTDGYKAPELQRMKKCSSRTDVYAFGILLLEILIGKKPGKNGRSGEYVDLPSMVKVAVLEETTMEVFDVELLKGIRSPMEDGLVQALKLAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSVTPF 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01639 687 FunFam Leucine-rich repeat receptor-like protein kinase 209 301 - -
Viun5g01639 687 ProSiteProfiles Protein kinase domain profile. 387 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01639 687 Pfam Leucine rich repeat N-terminal domain 48 78 IPR013210 -
Viun5g01639 687 SUPERFAMILY L domain-like 106 275 - -
Viun5g01639 687 SUPERFAMILY Protein kinase-like (PK-like) 391 663 IPR011009 -
Viun5g01639 687 MobiDBLite consensus disorder prediction 663 687 - -
Viun5g01639 687 Gene3D Phosphorylase Kinase; domain 1 376 463 - -
Viun5g01639 687 MobiDBLite consensus disorder prediction 668 687 - -
Viun5g01639 687 MobiDBLite consensus disorder prediction 339 361 - -
Viun5g01639 687 Gene3D Transferase(Phosphotransferase) domain 1 465 679 - -
Viun5g01639 687 Gene3D Ribonuclease Inhibitor 183 303 IPR032675 -
Viun5g01639 687 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 666 IPR046959 -
Viun5g01639 687 Pfam Protein kinase domain 398 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01639 687 Pfam Leucine rich repeat 211 269 IPR001611 GO:0005515
Viun5g01639 687 Gene3D Ribonuclease Inhibitor 44 182 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01639 Viun-Chr5 14043769 14046790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01639 15 687 Receptor kinase-like Gene Family AT3G24660 73.887 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Viun5g01639 Pkinase 3.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01639 - - gmx:100814814 1197.96