Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01637 ATGTCAATGCCGAGGCAAGCCTTGAGCAACCAAAAAAACCACAACCAAATGTCGAGGCAAGCTTTCATCACAAACCATCACCATCACCTTCTTCGCCATGTTCTTCTCTTTGCACTTCTTCTTCCTCTTTCATTTGCTGCAACTGATGAAGTTGCTGCATTGGTCTCATGGATGCAAAGCTCTTCCAAAACTCCTTCAGCCTTTTCCAGTTGGAACCCTTTGGACTCCAATCCCTGCAGCTGGTCTTACATCAAATGCTCTTCAGCAAACCTTGTCACTGAGATAACCATTCAAAATGTTGAGCTAGCCCTTCCCTTCCCTTCAAAAATCTCATCTTTTCCCTTCCTTCAAATATTGGTCATTTCTGGGGCTAACCTCACTGGGACTATCTCACCTGACATTGGAAACTGTTCTCAGCTTAGAGTTCTTGATCTTAGCTCCAATAGTCTTGTGGGTGGCATTCCTTCAAGTGTTGGGAGGCTCAAAAACCTCCAAAACTTGAGCTTGAACTCCAACCATCTCACAGGCTCAATCCCTAGTGAGCTTGGTGATTGTGTCAATCTCAAAACCCTTGACATTTTCGATAACAGTCTCAGTGGGGATCTTCCTGTGGAGCTAGGAAAGTTGTCAAATCTGGAGGTTATAAGAGCTGGAGGGAACAATGGCCTTGTGGGGAAGATTCCAGATGAGCTAGGAGATTGCAGAAATTTGACAGTGTTGGGTCTTGCTGAGACAAAAATTTCTGGTTCATTGCCTGCTTCAATCGGCAAGCTAGGTATGCTTCAGACCTTGTCTATTTATAGTACTATGCTCTCTGGTGAGATTCCTCCTCAAATAGGGAACTGTTCAGAGCTTGTCAATTTATTTTTTTATGAGAATGACCTCTCTGGTTCCCTGCCAAGAGAGATTGGTATGCTTCAGAAGCTGGAAAAGATGCTGCTGTGGCAAAACAATTTTGTTGGAGACATTCCTGAGGAAATTGGTAACTGCAGAAACTTGAAGATTCTTGATGTCTCCTTGAATTCTCTCTCTGGTGGAATACCCCAAAGTTTGGGGAAACTCTCAAATCTTGAAGAACTTATGTTGAGTAACAATAACATCTCTGGTTCCATACCACCAGCTCTATCCAATCTCTCAAACCTCGTACAGTTGCAGTTGGATACAAATCAGCTATCAGGTTCAATTCCACCTGGGATTGGAAGCTTGACAAAGCTAACAGTCTTTTTTGCTTGGCAGAACAAACTTGAAGGTGGCATTCCATCATCCTTGGGAGGTTGTAGAAGCCTTGAGGCTTTGGATTTGTCATACAATGCACTCACTGATAGCTTACCCCCAGGCCTGTTCAAACTTCAAAATTTAACAAAGCTTCTGCTAATCTCTAATGATATTTCTGGCCCTATTCCTCCTGAGATTGGCAACTGCACTTCCCTCATTCGCCTCCGACTTGTAGGCAACAGAATCAGTGGGGATATACCAAGAGAAATTGGCTCTCTTAAGAGCCTTTATTTCCTGGATCTGTCTGAAAATCAGCTTACTGGGTCATTACCATTTGAGATTGGAAACTGTAAAGAACTGCAAATGCTGAATCTAAGCAACAACTCCCTTTCTGGTGCTTTGCCTAGTTATCTGTCTTCTCTCACAAGGTTAGAGGTCTTGGATGTTTCTATGAATAACTTATCTGGTGAGGTTCCAATGAGTATTGGCCAACTCACTTCACTTCTTAGAGTAATCCTAAGTAGAAACTCTTTCTCTGGGCCAATTCCCTCCTCAATTGGGCAATGTTCAGGTCTTCAGCTTCTAGATCTTAGCAGCAACAATTTTTCAGGGAGCATTCCACCAGAACTGCTTCAAATTGAAGCACTTGATATTTCTCTAAATCTGAGTCACAATGCAATATCTGGAGTGATCCCACAAGAGATTTCTTCTCTGAAAAAACTGTCAGTTCTAGACCTTTCACACAACAATCTTGAAGGTGACTTGGCGGCCTTTTCAGGGCTAGAAAATCTTGTTTCTCTAAACATTTCCTACAACAAAATCACTGGTTATCTTCCAGACACCAAGTTATTCCATCAACTATCAGCAACAGATTTGGCTGGAAACCAAGGTTTGTGTCCTAATGGTCATGATTCATGTTTTGTTAGCGGTGATGCTATGACAAAAATGCTTAATGGTAATAATTCTAAGAGGTCAGAGATAATCAAACTGGCTATTGGGCTGCTCAGTGCCTTGATTGTTGCAATGTCAGTATTTGGAGTTGTTACTGTCTTTCGAGCAAGGAAAATCATTCAAGCAGACAATGATTCTGAGATGGGAGGAGATTCATGGCCTTGGCAGTTCACCCCATTCCAAAAGGTAAACTTCTCTGTGGAGCAAGTCTTAAAGTGTTTGGTGGAATCCAATGTAATTGGAAAGGGGTGTTCAGGGATTGTTTATCGTGCCGAAATGGAAAACGGGGATATCATTGCTGTGAAAAGACTATGGCCAACAACAATAGCTGCAAAATGTGATGATCAAAGTGACAAGTTAGCAGTTAATGGAGGGGTACGTGATTCCTTTTCAGCAGAGGTAAAAACTCTCGGTTCAATTCGCCACAAGAACATTGTAAGGTTCTTGGGTTGCTGTTGGAACAGAAACACAAGGTTGCTTATGTATGATTACATGCCAAATGGGAGTCTGGGAAGTCTGCTTCATGAACGAAGTGGCAACTGCTTGGAATGGGACATAAGGTTTCGGATAATACTAGGAGCAGCACAAGGTGTTGCTTATTTGCACCATGATTGTGCTCCTCCAATTGTTCATAGGGACATCAAGGCCAACAACATCCTCATAGGCCCTGAATTTGAACCATACATAGCTGATTTTGGGCTTGCAAAACTTGTTGATGATGGAGATTTCGCTCGATCTTCTAGCACACTAGCTGGTTCCTATGGTTACATTGCTCCTGAGTATGGTTACATGATGAAAATAACAGAGAAAAGTGATGTTTATAGCTATGGCATTGTTGTGCTAGAAGTCCTAACAGGGAAGCAACCGATTGATCCAACAATACCTGATGGACTCCACATTGTTGATTGGGTAAGACAGAAAAGAGGTGGAGTTGAAGTGGTGGATGAAAGCTTGAGAGCTCGACCAGAATCTGAAATTGAGGAAATGTTGCAGACCTTAGGAGTGGCTTTGCTGTGTGTGAACTCAAGCCCAGATGACAGACCAACCATGAAAGATGTTGTAGCAATGATGAAGGAAATTAGGCAGGAGAGAGAGGAATGTGTGAAAGTTGACATGCTTCTTCATGCATCTTCTGCAAATGATCAACAAGAAAGAAATGTTCCTAATGAAGAACCAATGTCAGTGATAAGCACCAGCAGCACAAATCTGCATCTGCATTACTCTCCTCATCGCCCTCAAACACCCAAGTAA 3417 0.4246 MSMPRQALSNQKNHNQMSRQAFITNHHHHLLRHVLLFALLLPLSFAATDEVAALVSWMQSSSKTPSAFSSWNPLDSNPCSWSYIKCSSANLVTEITIQNVELALPFPSKISSFPFLQILVISGANLTGTISPDIGNCSQLRVLDLSSNSLVGGIPSSVGRLKNLQNLSLNSNHLTGSIPSELGDCVNLKTLDIFDNSLSGDLPVELGKLSNLEVIRAGGNNGLVGKIPDELGDCRNLTVLGLAETKISGSLPASIGKLGMLQTLSIYSTMLSGEIPPQIGNCSELVNLFFYENDLSGSLPREIGMLQKLEKMLLWQNNFVGDIPEEIGNCRNLKILDVSLNSLSGGIPQSLGKLSNLEELMLSNNNISGSIPPALSNLSNLVQLQLDTNQLSGSIPPGIGSLTKLTVFFAWQNKLEGGIPSSLGGCRSLEALDLSYNALTDSLPPGLFKLQNLTKLLLISNDISGPIPPEIGNCTSLIRLRLVGNRISGDIPREIGSLKSLYFLDLSENQLTGSLPFEIGNCKELQMLNLSNNSLSGALPSYLSSLTRLEVLDVSMNNLSGEVPMSIGQLTSLLRVILSRNSFSGPIPSSIGQCSGLQLLDLSSNNFSGSIPPELLQIEALDISLNLSHNAISGVIPQEISSLKKLSVLDLSHNNLEGDLAAFSGLENLVSLNISYNKITGYLPDTKLFHQLSATDLAGNQGLCPNGHDSCFVSGDAMTKMLNGNNSKRSEIIKLAIGLLSALIVAMSVFGVVTVFRARKIIQADNDSEMGGDSWPWQFTPFQKVNFSVEQVLKCLVESNVIGKGCSGIVYRAEMENGDIIAVKRLWPTTIAAKCDDQSDKLAVNGGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLHERSGNCLEWDIRFRIILGAAQGVAYLHHDCAPPIVHRDIKANNILIGPEFEPYIADFGLAKLVDDGDFARSSSTLAGSYGYIAPEYGYMMKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGLHIVDWVRQKRGGVEVVDESLRARPESEIEEMLQTLGVALLCVNSSPDDRPTMKDVVAMMKEIRQEREECVKVDMLLHASSANDQQERNVPNEEPMSVISTSSTNLHLHYSPHRPQTPK 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01637 1138 Gene3D Ribonuclease Inhibitor 161 242 IPR032675 -
Viun5g01637 1138 ProSiteProfiles Leucine-rich repeat profile. 645 667 IPR001611 GO:0005515
Viun5g01637 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 931 943 IPR008271 GO:0004672|GO:0006468
Viun5g01637 1138 Gene3D Transferase(Phosphotransferase) domain 1 887 1103 - -
Viun5g01637 1138 SUPERFAMILY RNI-like 220 512 - -
Viun5g01637 1138 Pfam Leucine rich repeat 331 391 IPR001611 GO:0005515
Viun5g01637 1138 Pfam Leucine rich repeat 596 656 IPR001611 GO:0005515
Viun5g01637 1138 SUPERFAMILY L domain-like 444 704 - -
Viun5g01637 1138 SUPERFAMILY L domain-like 70 276 - -
Viun5g01637 1138 ProSiteProfiles Protein kinase domain profile. 796 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01637 1138 Gene3D Ribonuclease Inhibitor 442 539 IPR032675 -
Viun5g01637 1138 Gene3D Ribonuclease Inhibitor 347 441 IPR032675 -
Viun5g01637 1138 SMART LRR_typ_2 161 185 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 570 594 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 354 377 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 498 522 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 426 450 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 306 330 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 643 665 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 378 402 IPR003591 -
Viun5g01637 1138 SMART LRR_typ_2 666 691 IPR003591 -
Viun5g01637 1138 PRINTS Leucine-rich repeat signature 501 514 - -
Viun5g01637 1138 PRINTS Leucine-rich repeat signature 643 656 - -
Viun5g01637 1138 SMART serkin_6 796 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01637 1138 Pfam Leucine Rich Repeat 139 159 IPR001611 GO:0005515
Viun5g01637 1138 ProSitePatterns Protein kinases ATP-binding region signature. 802 834 IPR017441 GO:0005524
Viun5g01637 1138 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 317 1078 - -
Viun5g01637 1138 MobiDBLite consensus disorder prediction 1100 1138 - -
Viun5g01637 1138 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 47 203 - -
Viun5g01637 1138 Gene3D Ribonuclease Inhibitor 49 160 IPR032675 -
Viun5g01637 1138 SUPERFAMILY Protein kinase-like (PK-like) 779 1079 IPR011009 -
Viun5g01637 1138 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 887 1097 - -
Viun5g01637 1138 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 428 715 - -
Viun5g01637 1138 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 302 410 - -
Viun5g01637 1138 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 779 886 - -
Viun5g01637 1138 Pfam Leucine rich repeat N-terminal domain 48 87 IPR013210 -
Viun5g01637 1138 FunFam Predicted protein 204 301 - -
Viun5g01637 1138 Gene3D Ribonuclease Inhibitor 624 711 IPR032675 -
Viun5g01637 1138 Gene3D Ribonuclease Inhibitor 245 346 IPR032675 -
Viun5g01637 1138 Gene3D Ribonuclease Inhibitor 540 623 IPR032675 -
Viun5g01637 1138 Pfam Leucine Rich repeat 426 441 IPR001611 GO:0005515
Viun5g01637 1138 Pfam Protein tyrosine and serine/threonine kinase 799 1077 IPR001245 GO:0004672|GO:0006468
Viun5g01637 1138 MobiDBLite consensus disorder prediction 1100 1130 - -
Viun5g01637 1138 ProSiteProfiles Leucine-rich repeat profile. 356 379 IPR001611 GO:0005515
Viun5g01637 1138 Gene3D Phosphorylase Kinase; domain 1 780 886 - -
Viun5g01637 1138 SMART LRR_sd22_2 643 668 - -
Viun5g01637 1138 SMART LRR_sd22_2 137 169 - -
Viun5g01637 1138 SMART LRR_sd22_2 354 380 - -
Viun5g01637 1138 SMART LRR_sd22_2 185 214 - -
Viun5g01637 1138 SMART LRR_sd22_2 402 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01637 Viun-Chr5 13994042 13998409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01637 45 1130 Receptor kinase-like Gene Family AT5G56040 47.736 0.0 982
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Viun5g01637 PK_Tyr_Ser-Thr 1.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01637 - - gmx:100794698 1979.91