Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01594 ATGTCTCCAGCAGGCTCAGGTTCAGGTTCAGGTTCAGGTTCTTCAAGATGGAGCCCTACCACGGAACAACTCATGATCTTAGAGGAGCTCTACAGGAGTGGCATTAGAACTCCTAGTGCCTCACAAATTCAGCAAATTACCACACACCTTTCTTTCTATGGCAGAATAGAAGGAAAGAATGTGTTCTACTGGTTTCAGAACCACAAGGCTAGGGATAGACAAAAGCTCAGAAGGAAACTCACCAAGCAACTGCAGCTACAGCAACAACAACAACTCCATCATTGCCATCTCAATCCAGATATCACTAACCACTATTTTGCTGCTGCTGCTGCTGCTTATTCCCCTTGTTCTTCAACCCCGGATTTTCCCTTTTATAACCCTCCCACCTTTCTCTTTCAGGGAGCAGGAGGATCTGTGAACACATCTGAACAGGCATTGAATTGCGCATGGAGGGAAGGGGTGACCTTCTACAACAATGGTTGGAGTACACCTATGAATGTTAACAACCAAGCATCTTCATCTTCATGTTGCACTTCTTCTTCTCGACCCCTCAAGACCCTTGATCTCTTTCCGCTCACTACCACCAGAACCGATGAAGACTGCACCACCCCACCACCCAAGTAG 624 0.4679 MSPAGSGSGSGSGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNHKARDRQKLRRKLTKQLQLQQQQQLHHCHLNPDITNHYFAAAAAAYSPCSSTPDFPFYNPPTFLFQGAGGSVNTSEQALNCAWREGVTFYNNGWSTPMNVNNQASSSSCCTSSSRPLKTLDLFPLTTTRTDEDCTTPPPK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01594 207 Gene3D - 9 75 - -
Viun5g01594 207 SMART HOX_1 12 79 IPR001356 GO:0003677
Viun5g01594 207 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 7 199 IPR044555 GO:0003700|GO:0099402
Viun5g01594 207 CDD homeodomain 16 75 IPR001356 GO:0003677
Viun5g01594 207 SUPERFAMILY Homeodomain-like 8 78 IPR009057 -
Viun5g01594 207 ProSiteProfiles 'Homeobox' domain profile. 10 75 IPR001356 GO:0003677
Viun5g01594 207 FunFam WUSCHEL-related homeobox 4 14 81 - -
Viun5g01594 207 Pfam Homeodomain 15 74 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01594 Viun-Chr5 13273433 13274800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01594 9 96 Wox Gene Family AT3G11260 57.955 1.08e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Viun5g01594 Homeodomain 6.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01594 - - gmx:102663963 216.083