Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01587 ATGCCTCATTCTTCTTCTTCTCCTTCTTCCGTTCCAACCATTTCCAATCTCCGTTTTCGCGCCCTAATACTTGGGTTCTCCAAGAACTACGCAATCGCTGCATTCGTCTTCCTCCTCCTCTTCTCCCTCTCTATCTTCTCTCACTTGGATTCCCGTTCCCGTTCCCGTCCCGGTTATCCCTCCCATCCACGCTCCACTCTAGTTCCCTTAACGCTCCTCCGAAACGTCAATCGAACGCGCGCGCTTTGCTTGGACGGGAGCGCCCCCGGTTACCATTTCCAAAGCGGGTTCGGATCCGGATCTCGCAATTGGTTGCTCCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTACTCAACGAAAATTCACTCATTTGGGGTCTTCTAACTATATGGAAAAACTTATTCCTTTTTCAGGAATATTGAGCCCTGACCCCTCTCAAAACCCAGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCTTTTGCTGGTCACCCCGAGAGCGAGCAGAGAGGAAGCGAGTTATTTTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCCTGTCCGAAGCAAAGCAGGCGTTGCTCTCAGGATGCTCTGCTGGAGGGTTAGCAGCTCTTATACACTGTGACAACTTCCGACAAGTACTTCCTAAAGAAGCAACTGTTAAGTGCCTTTCTGATGCAGGGTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCCTTCTATCATGATGTTGCCCAGCTCCAGGGTCTTGAAAAAAGTTTGCACAAAGATTGCATTGCTAAAATGGAACCATATAAGTGTCTCTTTCCACAAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATCTTGGTACCTCAAGGATCAGATCCCCTTGGTCACTGGCAAAGCTGCAGACTGAATATTCGCAATTGTAATGCTAACATGATTGATAAACTTGATGGTTACCGTGGCTCTTTACTGAAGACTTTGAATGAATTCCTACAACGAAAGGAGATTGGAATGTTTATAAATTCCTGCTTTGTCCATTGCCAGACTGAGATGGAAGTAACGTGGCATTCTCCCAACTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGATCGAGAAGCTGTAAAGCGTATTGACTGCTCTTCTTTTCCGTGCAATCCCACTTGCCACAATATGGATTTCACTTGA 1305 0.4475 MPHSSSSPSSVPTISNLRFRALILGFSKNYAIAAFVFLLLFSLSIFSHLDSRSRSRPGYPSHPRSTLVPLTLLRNVNRTRALCLDGSAPGYHFQSGFGSGSRNWLLHIEGGGWCNSIASCTQRKFTHLGSSNYMEKLIPFSGILSPDPSQNPDFFNWNKVKIRYCDGASFAGHPESEQRGSELFFRGQVIWEAIMDELLSIGLSEAKQALLSGCSAGGLAALIHCDNFRQVLPKEATVKCLSDAGFFLDEKDISGNSTMRSFYHDVAQLQGLEKSLHKDCIAKMEPYKCLFPQEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSDPLGHWQSCRLNIRNCNANMIDKLDGYRGSLLKTLNEFLQRKEIGMFINSCFVHCQTEMEVTWHSPNSPKINDKTIAESVGDWYFDREAVKRIDCSSFPCNPTCHNMDFT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01587 434 Pfam Pectinacetylesterase 65 412 IPR004963 GO:0016787
Viun5g01587 434 PANTHER NOTUM-RELATED 40 431 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01587 Viun-Chr5 13219499 13227522 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01587 38 399 Carbohydrate Esterase AT3G09410 60.326 1.38e-166 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01587 K19882 - gmx:100792819 752.666