Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01586 ATGCCTCATTCTTCTTCTTCTCCTTCTTCCGTTCCAACCATTTCCAATCTCCGTTTTCGCGCCCTAATACTTGGGTTCTCCAAGAACTACGCAATCGCTGCATTCGTCTTCCTCCTCCTCTTCTCCCTCTCTATCTTCTCTCACTTGGATTCCCGTTCCCGTTCCCGTCCCGGTTATCCCTCCCATCCACGCTCCACTCTAGTTCCCTTAACGCTCCTCCGAAACGTCAATCGAACGCGCGCGCTTTGCTTGGACGGGAGCGCCCCCGGTTACCATTTCCAAAGCGGGTTCGGATCCGGATCTCGCAATTGGTTGCTCCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTACTCAACGAAAATTCACTCATTTGGGGTCTTCTAACTATATGGAAAAACTTATTCCTTTTTCAGGAATATTGAGCCCTGACCCCTCTCAAAACCCAGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCTTTTGCTGGTCACCCCGAGAGCGAGAGAGGAAGCGAGTTATTTTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCCTGTCCGAAGCAAAGCAGGCGTTGCTCTCAGGATGCTCTGCTGGAGGGTTAGCAGCTCTTATACACTGTGACAACTTCCGACAAGTACTTCCTAAAGAAGCAACTGTTAAGTGCCTTTCTGATGCAGGGTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCCTTCTATCATGATGTTGCCCAGCTCCAGGGTCTTGAAAAAAGTTTGCACAAAGATTGCATTGCTAAAATGGAACCATATAAGTGTCTCTTTCCACAAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATCTTGGTACCTCAAGGATCAGATCCCCTTGGTCACTGGCAAAGCTGCAGACTGAATATTCGCAATTGTAATGCTAACATGATTGATAAACTTGATGGTTACCGTGGCTCTTTACTGAAGACTTTGAATGAATTCCTACAACGAAAGGAGATTGGAATGTTTATAAATTCCTGCTTTGTCCATTGCCAGACTGAGATGGAAGTAACGTGGCATTCTCCCAACTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGATCGAGAAGCTGTAAAGCGTATTGACTGCTCTTCTTTTCCGTGCAATCCCACTTGCCACAATATGGATTTCACTTGA 1302 0.447 MPHSSSSPSSVPTISNLRFRALILGFSKNYAIAAFVFLLLFSLSIFSHLDSRSRSRPGYPSHPRSTLVPLTLLRNVNRTRALCLDGSAPGYHFQSGFGSGSRNWLLHIEGGGWCNSIASCTQRKFTHLGSSNYMEKLIPFSGILSPDPSQNPDFFNWNKVKIRYCDGASFAGHPESERGSELFFRGQVIWEAIMDELLSIGLSEAKQALLSGCSAGGLAALIHCDNFRQVLPKEATVKCLSDAGFFLDEKDISGNSTMRSFYHDVAQLQGLEKSLHKDCIAKMEPYKCLFPQEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSDPLGHWQSCRLNIRNCNANMIDKLDGYRGSLLKTLNEFLQRKEIGMFINSCFVHCQTEMEVTWHSPNSPKINDKTIAESVGDWYFDREAVKRIDCSSFPCNPTCHNMDFT 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01586 433 Pfam Pectinacetylesterase 65 411 IPR004963 GO:0016787
Viun5g01586 433 PANTHER NOTUM-RELATED 40 430 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01586 Viun-Chr5 13219499 13227522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01586 38 398 Carbohydrate Esterase AT3G09410 60.326 3.37e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01586 K19882 - gmx:100792819 746.117