Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01585 ATGCCTCATTCTTCTTCTTCTCCTTCTTCCGTTCCAACCATTTCCAATCTCCGTTTTCGCGCCCTAATACTTGGGTTCTCCAAGAACTACGCAATCGCTGCATTCGTCTTCCTCCTCCTCTTCTCCCTCTCTATCTTCTCTCACTTGGATTCCCGTTCCCGTTCCCGTCCCGGTTATCCCTCCCATCCACGCTCCACTCTAGTTCCCTTAACGCTCCTCCGAAACGTCAATCGAACGCGCGCGCTTTGCTTGGACGGGAGCGCCCCCGGTTACCATTTCCAAAGCGGGTTCGGATCCGGATCTCGCAATTGGTTGCTCCACATTGAGGGAGGAGGGTGGTGCAATTCAATAGCTTCATGTACTCAACGAAAATTCACTCATTTGGGGTCTTCTAACTATATGGAAAAACTTATTCCTTTTTCAGGAATATTGAGCCCTGACCCCTCTCAAAACCCAGATTTCTTTAACTGGAACAAGGTGAAGATACGCTATTGTGATGGTGCATCTTTTGCTGGTCACCCCGAGAGCGAGCAGAGAGGAAGCGAGTTATTTTTCAGAGGCCAGGTCATATGGGAAGCTATTATGGATGAACTCTTATCAATTGGCCTGTCCGAAGCAAAGCAGGCGTTGCTCTCAGGATGCTCTGCTGGAGGGTTAGCAGCTCTTATACACTGTGACAACTTCCGACAAGTACTTCCTAAAGAAGCAACTGTTAAGTGCCTTTCTGATGCAGGGTTCTTCCTAGATGAGAAGGATATTAGTGGAAACAGTACAATGAGATCCTTCTATCATGATGTTGCCCAGCTCCAGTGTCTCTTTCCACAAGAAATTGTTAAAAACATAAAGACTCCACTGTTCCTTGTTCATCCAGCTTATGATTTCTGGCAGATACGCAATATCTTGGTACCTCAAGGATCAGATCCCCTTGGTCACTGGCAAAGCTGCAGACTGAATATTCGCAATTGTAATGCTAACATGATTGATAAACTTGATGGTTACCGTGGCTCTTTACTGAAGACTTTGAATGAATTCCTACAACGAAAGGAGATTGGAATGTTTATAAATTCCTGCTTTGTCCATTGCCAGACTGAGATGGAAGTAACGTGGCATTCTCCCAACTCTCCTAAAATAAATGATAAGACAATTGCTGAATCTGTTGGTGATTGGTACTTTGATCGAGAAGCTGTAAAGCGTATTGACTGCTCTTCTTTTCCGTGCAATCCCACTTGCCACAATATGGATTTCACTTGA 1251 0.4524 MPHSSSSPSSVPTISNLRFRALILGFSKNYAIAAFVFLLLFSLSIFSHLDSRSRSRPGYPSHPRSTLVPLTLLRNVNRTRALCLDGSAPGYHFQSGFGSGSRNWLLHIEGGGWCNSIASCTQRKFTHLGSSNYMEKLIPFSGILSPDPSQNPDFFNWNKVKIRYCDGASFAGHPESEQRGSELFFRGQVIWEAIMDELLSIGLSEAKQALLSGCSAGGLAALIHCDNFRQVLPKEATVKCLSDAGFFLDEKDISGNSTMRSFYHDVAQLQCLFPQEIVKNIKTPLFLVHPAYDFWQIRNILVPQGSDPLGHWQSCRLNIRNCNANMIDKLDGYRGSLLKTLNEFLQRKEIGMFINSCFVHCQTEMEVTWHSPNSPKINDKTIAESVGDWYFDREAVKRIDCSSFPCNPTCHNMDFT 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01585 416 Pfam Pectinacetylesterase 65 270 IPR004963 GO:0016787
Viun5g01585 416 PANTHER NOTUM-RELATED 40 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01585 Viun-Chr5 13219499 13227523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01585 38 381 Carbohydrate Esterase AT3G09410 57.493 3.28e-153 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01585 K19882 - gmx:100792819 709.523