Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01582 ATGGGTAATCTAATCGGCAACCTCTGCCTCTGTTCCTCCGGCGACCGCTCCGGAAGGTTCGAGAACAGAGCTTCCTTCCTTTCCAAGCAAAACCAGAATTCCCTCGGAAACTCTATTTGCTATGTGAGACCCGACACGTGTCGGTTCTCCAGCGAGGCGTTTTCTGACGATGATGACACCCTCATCACTTTCCGGTCGGTTTCCGGCGCTACCGTGAGTGCAAACACGTCGGCGACGCCTTCAACTTCGCTCGATGATTCACTTCAACACAGCACCGTTTTGGATTCCTCTGCCTCGTTTGAGAGCTCTGGCTCCTTCACTTCTACTTTGGTGCCTTTTCAGCATCAACACGTTCATCGTGGATTCTCTCTGGGAGGGTGTTCGGAAAGAGGGTTATATTGGGGTCCTCGTGATCGTGTGATGAACGATGAAGGGTCCATCGAGAAAGATTCTTCTGAGGTAGCAATGAACAAGGGAAAGGGAAGTAAAAGACATTGGAAAAAGGTTCTGAGAAAGATTTCCATTGGGGGAATGTCTGTTTTCAAGAACAATGATAATACTAATGCAAGAGTGAGTTGCAGCACTAGTTTGAGTGCTGAGACGAGTTTGCATGGTGTGGAGGTTGATGATAACTATTTGGATAGTGATGTGTTGATGGGGTGTGAGAATCTTCATTGGGCTCAAGGGAGAGCGGGTGAGGATCGTTTGCATATTGTGATTTGTGAGGATCATGGATGGGTTTTTGTGGGGATTTATGATGGGTTTAATGGCCCTGATGCCACTGATTTTCTTCTCAACAATTTGTTTTATGCCGTGAATGATGAGCTCAAGGAGATGTTGTGTGGTCACAACAAGTTTGAGCTCAAGGATTCAGACTCTTTGGAGCTGAGGGAGAAGGTGTTGTTTAGGGGAAATGGAGTGGTTGATGGTTGTTGTTCTTCAGGTGATAATAGAGAAAATTATCCAATAGAAAATGGAGAGTTGAATTTGGAATGTGAGTCAGAAAGAGTAGAGGGAATGAATGGGATAAACAGTGAAAGAGTGGATTTGAGTCACTCAGAAGTATTACAGGCTCTATCAGAGTCATTGAGGAAGACTGAGGATGTTTTTATGAGGACTGCTGAAGAGATGATTGGTCACAACCCTGTGTTGGCTATGATGGGTTCTTGTGTTTTGGTGATGTTGATGAAGGGTCAAGATGTTTACCTGATGAATGTGGGAGATAGCCGTGCTGTGTTGGCCACTCACAGTGGGGAATCTCTACAGCTCACCAAGGAGCATAGCACTCAAGTGAAAGAGGAGGTTTACAGAATCAGGAAGGAGCATCCTGATGACCCTTTAGCAGTAACTAGAGGCCGAGTGAAGGGTCGCTTGAGTGTCACAAGGGCTTTTGGGGCAGGGTTCCTTAAGCAGCCTAAGCAAAACAATGCAGTATTAGAGACTTTCAGAGTGAGCTACATAGGGGAATCTCCATACATCACATGTTTCCCTTCACTCCACCACCACAAGCTCAATCCAAATGACAAGTTCCTCATACTGTCTTCAGATGGACTCTACCAATACTTCACCAACGAAGAAGCAGCTGCCAAAGTAGAGTCATTCATCACCATGTTTCCTGATAGAGATCCTGCACAACTTCTCATTGAAGAAGCATTAGATAGAGCAGCAAAAAGGGCTGGTTTGGAGTTCCATGAACTGCTTGATATTCCACAGGGGGAACGCCGTCATTACCATGATGACATTTCCATTGTCATAATCTCCTTAGAGGGAAAAATATGGCGTTCATTGGTGTAA 1794 0.4554 MGNLIGNLCLCSSGDRSGRFENRASFLSKQNQNSLGNSICYVRPDTCRFSSEAFSDDDDTLITFRSVSGATVSANTSATPSTSLDDSLQHSTVLDSSASFESSGSFTSTLVPFQHQHVHRGFSLGGCSERGLYWGPRDRVMNDEGSIEKDSSEVAMNKGKGSKRHWKKVLRKISIGGMSVFKNNDNTNARVSCSTSLSAETSLHGVEVDDNYLDSDVLMGCENLHWAQGRAGEDRLHIVICEDHGWVFVGIYDGFNGPDATDFLLNNLFYAVNDELKEMLCGHNKFELKDSDSLELREKVLFRGNGVVDGCCSSGDNRENYPIENGELNLECESERVEGMNGINSERVDLSHSEVLQALSESLRKTEDVFMRTAEEMIGHNPVLAMMGSCVLVMLMKGQDVYLMNVGDSRAVLATHSGESLQLTKEHSTQVKEEVYRIRKEHPDDPLAVTRGRVKGRLSVTRAFGAGFLKQPKQNNAVLETFRVSYIGESPYITCFPSLHHHKLNPNDKFLILSSDGLYQYFTNEEAAAKVESFITMFPDRDPAQLLIEEALDRAAKRAGLEFHELLDIPQGERRHYHDDISIVIISLEGKIWRSLV 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01582 597 Gene3D - 193 594 IPR036457 -
Viun5g01582 597 PANTHER PROTEIN PHOSPHATASE 2C 187 586 IPR015655 GO:0004722|GO:0006470
Viun5g01582 597 SUPERFAMILY PP2C-like 230 589 IPR036457 -
Viun5g01582 597 CDD PP2Cc 231 588 IPR001932 -
Viun5g01582 597 SMART PP2C_4 217 586 IPR001932 -
Viun5g01582 597 Pfam Protein phosphatase 2C 340 557 IPR001932 -
Viun5g01582 597 ProSiteProfiles PPM-type phosphatase domain profile. 218 588 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01582 Viun-Chr5 13203568 13206693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01582 1 597 PP2C-type Phosphatase Gene Family AT1G07630 45.388 1.92e-174 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01582 - K01102 gmx:100794388 980.704