Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01556 ATGGCTGCTACACCAAAACCCGTCAAATCTTTCACTCCGAAGAAATCCTCCGACACCTCAATTTCAGTTTCCAAAGTGAGGGTTATCGTCAGGGTCAGACCCTTCCTCGCACACGAAACCTCAACAAAAAACGGCGACCCTGTTTCGTGCATATCCGTCTTGGACCAAGAGTCCGAGTTTCCCCAGGAAGAGGTTGCTGTTTATCTCAAAGACCCAGATACCAGCCGGAATGAGTGCTACCAGTTGGACTCTTTCTTTGGGCAAGAAGATGACAATGTGGGACAGATATTCTGCAGAGAAGTGAGCCCCTTGATTCCGGGAATGTTCGGTGGATCCAATGCCACAGTGTTTGCTTATGGGGCTACTGGCAGTGGGAAGACATACACCATGCAGGGAACTGAGGAACAACCTGGGTTGATGCCACTGGCAATGTCTATGATCCTGTCTATTTGCCAGAGCACTGGCAGCACAGCACAGATCTCATACTATGAGGTCTACATGGACCGATGCTACGACCTTCTGGAGCTAAAAGCGAACGAGATTTCAGTTTGGGATGACAAAGATGGACAGATTCACCTCCGGGGACTGTCTCAGGTTCCTATAAACACCATGTCTGAATTTCAAGATGTTTTCTCATGTGGAGTTCAGAGACGCAAAGTTGCCCACACAGCTCTCAATGATGTCTCTAGTAGGAGTCACGGAGTGCTTGTGATATCTGTGTCCACTCCTTCAGCTGATGGCACCGGAACTGTTGTATGTGGGAAGTTGAATCTCATAGACTTGGCAGGTAATGAAGACAACAGAAGGACCTGCAATGAAGGGATTCGTCTCCAAGAGAGTGTAAAGATAAACCAGTCCTTGTTTGCTCTGTCAAATGTGATATATGCATTGAACAACAATAAACCTAGAGTACCCTACCGAGAAAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGGGGAACAAGTCGTGCACTGATGGTTGCTTGCCTGAATCCAGGAGAATACCAGGAATCTGTTTATACTGTGAGTTTAGCTGCTCGATCAAGGCATGTCACAAATTTTGTAACTTCAGCTCACAAACAAGAGACCCCAAAAGTTAAAGTTGACATGGAAACAAAATTGAGAGCTTGGTTAGAATCAAAAGGCAAAACAAAGAGTACACAAAGACTTGGGCCATTTAATTCTCCTCTTCTTAAGAAAAATCCCGTTTCCATTGTTACACCTGCTAAGAGATCCATTACCTTTAACAGTTCAGTGAAGAAGGGGGGAAGAACTGCCATCAACTTCGATACTAAACGTACCAATGAAAGCAGTGCCTTTGCTGTGGCTTTTGGAAATTTACTAGATGTTGAAGCTTCAATTGATTCATGCATGGAGAATGCACCATCTGCTGTCAAGGACAATGATAACAAAGAGACTGAGCATGATGCTAATAAGGCTGCCTGGGAATCATACAAAAATCTACCTGCCGAGCCATCGAGAAAGGGAGTGAACTCTAATAATGAGAGTAAAGATGCAGCACAGAGTCCTTTAAGAAAAGCCCTCTCTCCCATCAACATCAATGCTATTCAAGAACCCCTTGAGGCATTGTCTTTCACACAAACACCTTTTCTGACAACCTGCTCTAATAAAGGGATACAAAAGGATGCCACTCCACTTGGAAAATTTAGCACACGAAGTTCTACACTGAAGAACTGTCTAGTTCAAGAATACCTCGATTTCTTGAACAATGCTAGCAGAGAGGAACTACTTGAGTTAAAGGGCATAGGAGAGAAAATGGCAGAATACATTATAGACCTCAGAGAAGAAACTCCTCTTAAATCGTTAAATGATTTGGAGAAGATAGGTCTCTCTAACAAGCAGGCCCATAATCTGTTCACTAAAGCTGCAAACAAGTTATTTGAAGAATAAGCTGAAGATTCAATACTTAATTGA 1938 0.4365 MAATPKPVKSFTPKKSSDTSISVSKVRVIVRVRPFLAHETSTKNGDPVSCISVLDQESEFPQEEVAVYLKDPDTSRNECYQLDSFFGQEDDNVGQIFCREVSPLIPGMFGGSNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSMILSICQSTGSTAQISYYEVYMDRCYDLLELKANEISVWDDKDGQIHLRGLSQVPINTMSEFQDVFSCGVQRRKVAHTALNDVSSRSHGVLVISVSTPSADGTGTVVCGKLNLIDLAGNEDNRRTCNEGIRLQESVKINQSLFALSNVIYALNNNKPRVPYRESKLTRILQDSLGGTSRALMVACLNPGEYQESVYTVSLAARSRHVTNFVTSAHKQETPKVKVDMETKLRAWLESKGKTKSTQRLGPFNSPLLKKNPVSIVTPAKRSITFNSSVKKGGRTAINFDTKRTNESSAFAVAFGNLLDVEASIDSCMENAPSAVKDNDNKETEHDANKAAWESYKNLPAEPSRKGVNSNNESKDAAQSPLRKALSPININAIQEPLEALSFTQTPFLTTCSNKGIQKDATPLGKFSTRSSTLKNCLVQEYLDFLNNASREELLELKGIGEKMAEYIIDLREETPLKSLNDLEKIGLSNKQAHNLFTKAANKLFEEXAEDSILN 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01556 645 Pfam Kinesin motor domain 31 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun5g01556 645 SMART kinesin_4 23 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun5g01556 645 Gene3D - 562 633 - -
Viun5g01556 645 CDD KISc_KID_like 26 350 - -
Viun5g01556 645 ProSitePatterns Kinesin motor domain signature. 254 265 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun5g01556 645 ProSiteProfiles Kinesin motor domain profile. 25 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun5g01556 645 MobiDBLite consensus disorder prediction 494 508 - -
Viun5g01556 645 FunFam Kinesin-like protein KIN-10C 562 634 - -
Viun5g01556 645 FunFam Kinesin-like protein 22 392 - -
Viun5g01556 645 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 24 395 IPR027640 GO:0003777|GO:0007018
Viun5g01556 645 Gene3D Kinesin motor domain 22 392 IPR036961 -
Viun5g01556 645 MobiDBLite consensus disorder prediction 490 512 - -
Viun5g01556 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 377 IPR027417 -
Viun5g01556 645 PRINTS Kinesin heavy chain signature 255 273 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun5g01556 645 PRINTS Kinesin heavy chain signature 223 240 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun5g01556 645 PRINTS Kinesin heavy chain signature 111 132 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun5g01556 645 PRINTS Kinesin heavy chain signature 304 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun5g01556 645 Pfam Helix-hairpin-helix motif 576 616 - -
Viun5g01556 645 SUPERFAMILY RuvA domain 2-like 569 617 IPR010994 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01556 Viun-Chr5 12992953 12996843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01556 25 384 Calmodulin-binding Proteins AT5G65930 32.708 5.06e-44 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01556 K10403 - gmx:100804591 1080.86