Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01544 ATGCAAAGATTGGTCATAATGGATCCACGTCTTTATGGGTTTAGTGGTCCCCCTAATGAAGTCCGGTTAGGAAATCAAAGATTTGAAAATGGTTTCTTTGATCAAAGTAGGGACTTTGGTTACCTTCAGTCCAATCTAGTGACAACTAAGACGCCTTCTTCATCCTCGGTTTTGACTCATGAGGAACCTTCTCCGGAGGAATGTGAATTTTCTGATGCAATTTTGAGTTACATCAGTCAGATCCTTATGGAGGAAGACATGGAAGATAAGACATGTATGCTGCATGACTCTTTGGATCTTCAAATTGCTGAGAGATCATTCTATGAGGTGATAGGTGAAGAGTACCCTTCTTCGCTTTTAGAAAATCCAGGTCCTGCTAATCCAGATGGTGGGAATGGGGATCATAATTTCTCTGAAAATTATGGTTCTTGTTCTTACAATGATGGTGATCTCAGTAGCATTTTTACTAATTTTCGTCAAAATTTGGGGGAACTCCCTAACCATAATTTACGAGGCAATAGCATTTCACAGTCATCTTGTAGCTCTTCTAATAGTGTGATAAGTAGTGTGGAAGGACCTGTGGACTCTCCAAGCAGTATTCTCCAGGTTCCTGATCTGAACAGTGAGAGTCAATCCATTTTGCAATTTCAGAAGGGTGTTGAGGAAGCTAGCAAGTTTCTTCCAAGTGGAAATGGTCTCTTTGCTAATTTGGGTGTGGCTAATTTTTCAAAACTAGAGCCTAAAATTGGGTGTAATGAATTGTCAGTTAAGGTGGAGAAGGATGTGGGGGAGTCTTTTCTTGCTGGGTCCAAAGGAAGGAAACATCATCTGAGGGAAGAAGGGGATGTTGAAGAGAATAGAAGCAGCAAGCAAGCTGCATATTTCTCCGAACCTACATTGCCATCATCTTCTATTGATGTAATCCTGCTTCATAGTTTAGGGGATGGTAAGAAGGTTTTGACGGCCCGTCGTGAGGCTTTGCAAACTAAGAATGACAAGATAGTACTGTCAAATGGTAAATCAAAGGCTTCCAACGGTGGTAAGGGACGTAGTAAGAAACAAAGTGGGAAAAAGGAAGTGATTGATTTGAGAACACTTTTGGTTCTTTGTGCACAAGCTGTTGCAGCAGATGACTATAGTGGCGCACAAGAGTTTCTAAAGCGAATCAGGAGGCACTCAAGCCCTTTTGGGGATGGAAATCAGAGGTTGGCTCATATCTTTGCTGATGGTCTTGAAGCGCGCTTGGCTGGGACTGGTAGCCAAATTTATAAAGGACTTGTTAGCAAAAGAACATCAGCTGCTGATTTTCTGAAGGCCTATCATCTGTATCTTGCTGCTTGCCCTTTTAGGAAGATGTCTAGTTTTATCTCTAATGTCACAATAAGGGAATCTTCCGCAAATTCAGCAAGAGTCCATGTTATAGATTTTGGTATCCTTTATGGTTTCCAGTGGCCTACTTTCATTCAGAGACTTTCATTAGCAGCAGTTGGAGGACCACCTAAACTTCGAATTACAGGAATAGACTTCCCACAACCTGGTTTCAGGCCTGCTGAGAGAATTTTAGAAACCGGACGCCGCTTGGCAGCTTATGCTGAATCATTTAAGGTGCCATTTGAGTATAATGCTATAGCAAAAAAGTGGGAAACAATTCAGCTTGAGGAACTGAAGATTGACAGGGAGGAGTACCTTGTTGTCACCTGTTTTTATCGTGGTAAAAATGTGCTTGATGAATCTGTGCTCGCGGACAGTCCGAGGAACAAATTCCTCAGTTTGATAAGGAAGATCAACCCGGATTTATTCATTCATGGCATTACTAACGGTGCCTTTAATGCGCCTTTCTTTGTTACTCGATTCAGGGAGGCACTGTTTCACTACTCTTCACTTTTTGACATGCTTGAAACTATTGTGCCTCAAGAGGACTGGGAGAGGATGCTGATAGAGAAAGAGATTTTTGGCAGGGAAGCATTGAATGTCATAGCTTGTGAAGGGTGTGAGAGAGTAGAGAGGCCAGAGACATATAGGCAGTGGCAAGCCCGGATTCTTAGGGCTGGATTTTCGCAACAATCTTTTGAACATGCTTTAGTAAAGAGGGCAATAGAGAAAGTATCAACTAGCTACCACAAGGATTTTGTTATTGATGAAGATAGCCAGTGGTTGTTGCAAGGTTGGAAGGGGCGGATTGTTTATGCCCTTTCTTGCTGGAAACCAGCATGA 2214 0.4223 MQRLVIMDPRLYGFSGPPNEVRLGNQRFENGFFDQSRDFGYLQSNLVTTKTPSSSSVLTHEEPSPEECEFSDAILSYISQILMEEDMEDKTCMLHDSLDLQIAERSFYEVIGEEYPSSLLENPGPANPDGGNGDHNFSENYGSCSYNDGDLSSIFTNFRQNLGELPNHNLRGNSISQSSCSSSNSVISSVEGPVDSPSSILQVPDLNSESQSILQFQKGVEEASKFLPSGNGLFANLGVANFSKLEPKIGCNELSVKVEKDVGESFLAGSKGRKHHLREEGDVEENRSSKQAAYFSEPTLPSSSIDVILLHSLGDGKKVLTARREALQTKNDKIVLSNGKSKASNGGKGRSKKQSGKKEVIDLRTLLVLCAQAVAADDYSGAQEFLKRIRRHSSPFGDGNQRLAHIFADGLEARLAGTGSQIYKGLVSKRTSAADFLKAYHLYLAACPFRKMSSFISNVTIRESSANSARVHVIDFGILYGFQWPTFIQRLSLAAVGGPPKLRITGIDFPQPGFRPAERILETGRRLAAYAESFKVPFEYNAIAKKWETIQLEELKIDREEYLVVTCFYRGKNVLDESVLADSPRNKFLSLIRKINPDLFIHGITNGAFNAPFFVTRFREALFHYSSLFDMLETIVPQEDWERMLIEKEIFGREALNVIACEGCERVERPETYRQWQARILRAGFSQQSFEHALVKRAIEKVSTSYHKDFVIDEDSQWLLQGWKGRIVYALSCWKPA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01544 737 MobiDBLite consensus disorder prediction 334 356 - -
Viun5g01544 737 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 286 728 IPR005202 -
Viun5g01544 737 Pfam GRAS domain family 363 735 IPR005202 -
Viun5g01544 737 ProSiteProfiles GRAS family profile. 354 735 IPR005202 -
Viun5g01544 737 MobiDBLite consensus disorder prediction 271 287 - -
Viun5g01544 737 MobiDBLite consensus disorder prediction 271 290 - -
Viun5g01544 737 MobiDBLite consensus disorder prediction 334 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01544 Viun-Chr5 12742627 12746187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01544 66 736 GRAS Transcription Factor Family AT2G37650 52.616 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Viun5g01544 GRAS 1.7e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01544 - - gmx:100801824 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01544 5 12742627 12746187 Viun5g01544 5 12742627 12746187 ECH