Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01532 ATGCAAAGAGGTAAGGTGAAGCTAGATGAAGATCTACGTCCTGATCGTGAGGATGATTTCCAAACAGACGATGAAGAAAATCAGGCACAAAGGGTGTTTGAACATTTGGATGATGATACTGATTCAGATAATTCACCCCCTTCACCAAGTTTATCCAACGATGTTTCCATGATCTCTTGGCCTCAAAGCTATAGACAATCTATGGACATGTTAACTAGTGCAACACCTCCTGGACTTAATTTGTTAAAGAGAATTGGTTCAGTAGGGAGAAGTAATTCTCCCATTACATCATTCAAGAGATCTCAAGAACAACAAGACGATTCTACCTTATCTCTACCCCTTGTTTCTGAGCCATGTGGATTCAAACAAGAGAGTCGTCTTGTATCAGTACCTCGTCTGCAACCACTTAGCAGTGCAAAATTTTCTATGGACGAATTGCCACCGCCACAGGAACAATGTTCATATGCAAAATCAGTAATTAATGAAAGCAATGATGGACTCAAAACCTACCCAGATATTGGCCAAGCTGCTTTTGGAATTGTTGGTCGTTTGGGGATTGCAGCTTCTTGTGTTGAGTATATAATACTAGTGAGTGATAACCTCTCATCACTATATCCTAACACCCAGATGAGATTTGGTGGGATTGATTTGAATTCTGAAGAAATTTTTGCCATTACAGCAGCAGTTATTGTTCTACCAACAAAGTTGCCTCTGTGCTCAGTTGGAGGAATATTTGCAACAGTACTTGTTGCACTTTGCTTGTTTTGGGTTGGGACAATGGAGCAAGTTGTTGGATATAAGCCAGGAAAAAAAGTTTTAGACTTTGCAAACTTACCTGTCTCAGTTGGTCTCTATAGTTTTTGCTTTGCTGGCCATGCAGTTTTTCCTAACATCTACTCTTCTATGAAGGAACCATCCAAATTCCCATCAGTGTTATTTGTCTGCTTTGTGTTTTGCACTTTCATGTACGTGAGTGTGGGAATAATGGGCTATTTAACTTTTGGTGACTTAGTTTCATCTCAGTTTACCTTAAACATGCCGAAAGAATTATATGCATCTGAGATTGCAACTTGGACAACGCCATTACAGAAACTCAGAGAATAA 1104 0.3949 MQRGKVKLDEDLRPDREDDFQTDDEENQAQRVFEHLDDDTDSDNSPPSPSLSNDVSMISWPQSYRQSMDMLTSATPPGLNLLKRIGSVGRSNSPITSFKRSQEQQDDSTLSLPLVSEPCGFKQESRLVSVPRLQPLSSAKFSMDELPPPQEQCSYAKSVINESNDGLKTYPDIGQAAFGIVGRLGIAASCVEYIILVSDNLSSLYPNTQMRFGGIDLNSEEIFAITAAVIVLPTKLPLCSVGGIFATVLVALCLFWVGTMEQVVGYKPGKKVLDFANLPVSVGLYSFCFAGHAVFPNIYSSMKEPSKFPSVLFVCFVFCTFMYVSVGIMGYLTFGDLVSSQFTLNMPKELYASEIATWTTPLQKLRE 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01532 367 PANTHER OS05G0424000 PROTEIN-RELATED 166 360 - -
Viun5g01532 367 MobiDBLite consensus disorder prediction 1 15 - -
Viun5g01532 367 MobiDBLite consensus disorder prediction 25 42 - -
Viun5g01532 367 Pfam Transmembrane amino acid transporter protein 156 350 IPR013057 -
Viun5g01532 367 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01532 Viun-Chr5 12527575 12530566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01532 6 364 Amino Acid or Auxin Permease AAAP Family AT5G02180 39.278 6.50e-91 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01532 K15015 - cave:132161847 335.88