Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01497 ATGGAAGCCACTTCCATAACTTCGTTGTTGAAGGGCTTTTGTGATCACACACGATGGAAATATGCTGTTTTTTGGAAGCTTAACCACCATTTTCCTATGAATTTGACCTGGGAAAATGGTTACCAGAAAAGAAATGAGGTTGAGGAAAGTATGTGGGATGACGTCAATTTCAAATCCCCAGATGAGTTATATTTTTCAAGAGGTGAAAGTACTGATTATTCAGGAGATTATTCAGTTCGACTTCTCATGATTGAAATGTCCCATCGTAAATACAATTTGGGAGAAGGGGTTGTTGGTAAAGTAGCTCTTGCCAGGGATCATTGTTGGGTTTCCTGTGAGGATATTCTTACCAGTAAATTTGACACTGATTTAATCACAGAGTGTCCTGATGAGTGGTTTCTTCAAATTGCATGTGGCATCAAGACTATTGTGCTGGTACCGGTTCTTCCACTAGGGGTTTTGCAGTTTGGTTCATTTGAAGAGGTTGCTGAAGACCTGGAATTCGTTACCACTGTGAAGGAGAAGCTCCAATCTATTGATTGCATGGAAGCAAATATTTCCCCTTTGAACATGGGAACTGATTACCAAGATTGGTCATTCTCAGACCTAATGCATAATTTGATGAATAGCTTGGACGAATCATCTTCTGTTACTAAAACCGTATGGAAAAGTGAAGTTTCAACCAGTACTGCTTCGAACAGTGCAAATGGTTCAACAGGTCTGGACCCAACAATGCTATCATTTATTCAAGATGACTGTTCTGTGTCAAGACAAAATCTACTAAAATCTCTGAAAAGAGAAAATGTAAATGACATAGGTTCCTCATCAATTGATATGTCAACTGTTCCTAGACATATTAGTAAGATGGAGACAAAACCAAATCACATGGAAGCAGAGATGTGGTCCTGGTCAGTTTTTGAAGAGATGTCAAATGGATTAGACTCTTTCTCTGTGAAAAATATGACAGAGAAACAGTTTGGAGGCACTGAAAGCGGTTACTATGATGCTAAGAATTTCAATGACTTCACTTTTCCCTCAGAGTCAGAATTGCACAAAGCACTTGGATCAGTTGCATACTCTGTTGGTGATGCATACCATACCTCGTGTCTGATAACCAATAAAAAAGAGAGTGATCATATTAAAGGTTTTGGGTTTCCCGAAGATCTTGATCCAGAATATCTTTTAGATGCTGTTGTTGGCAATTTATGTAGTGCTGCAGATGATACTTCAAGTATTTCAAACAGTATCAGATCTCTTACAACTATGCCAACAGAGATTAGTGGTTCCCTGCAGCCAAAAAAATTTTCAGAAGAAAGCTACACTTTGATGGTGGATGATTCTGATGTGAAGAATGATCTTGTGCCTGCAGTTTCCGTCAAGAGAAAATATGAATTTTCTAACCATTTTTCATCATCTTTTGAGGGAAATGGAAGCTTATTGATTGATGAGGTGCCACAGGAAAAGGAAGATTGTCATATGCTTCCTATTACTGGACCAAAGCTCTCTAGCACAAACAAGAAAAGAACAAAAGTTGCTAACAACCAAAAGGCTAGGCCAAGAGATAGACAACTTATCATGGACAGAATGAAGGAGTTGAGAGAACTTGTCCCAGATGGTGGAAGGTGTAGCATTGACAACCTCTTGGAACGGACCATAAAGCACATGCTCTACTTGAGAAAGATAACAAGTCAGGCCGAGAAACTGAAACGATTTGCCAATCGAACGGTTGGTGAGAGCAAAAGACAGAAAATGAACGGTGGCCACCCAGGTAGGAGCTGTGCATTTGACTTTGAAAGTGAACTAGCATGGCCTATAGTCATAGAAGATCTTGAATGCACAGGGCACATGCTCATTGAGATGATATGCAATGAGCATGGCCTTTTCTTGGAGATTGCTCAAGTGATTCGGAAGCTGGATATCACCATCTTGAAGGGGATCTTGGAAAACCGTTCTAGCGACAGCTGGGCTTGTTTCATTGTTGAGGTTCCCAGAGGTTTTCACAGAATGGATGTTCTATGTCCATTATTGCATCTTCTGCAGCTGAGGAGAAACCCTATCTCGTACAAAAGCTGA 2073 0.4014 MEATSITSLLKGFCDHTRWKYAVFWKLNHHFPMNLTWENGYQKRNEVEESMWDDVNFKSPDELYFSRGESTDYSGDYSVRLLMIEMSHRKYNLGEGVVGKVALARDHCWVSCEDILTSKFDTDLITECPDEWFLQIACGIKTIVLVPVLPLGVLQFGSFEEVAEDLEFVTTVKEKLQSIDCMEANISPLNMGTDYQDWSFSDLMHNLMNSLDESSSVTKTVWKSEVSTSTASNSANGSTGLDPTMLSFIQDDCSVSRQNLLKSLKRENVNDIGSSSIDMSTVPRHISKMETKPNHMEAEMWSWSVFEEMSNGLDSFSVKNMTEKQFGGTESGYYDAKNFNDFTFPSESELHKALGSVAYSVGDAYHTSCLITNKKESDHIKGFGFPEDLDPEYLLDAVVGNLCSAADDTSSISNSIRSLTTMPTEISGSLQPKKFSEESYTLMVDDSDVKNDLVPAVSVKRKYEFSNHFSSSFEGNGSLLIDEVPQEKEDCHMLPITGPKLSSTNKKRTKVANNQKARPRDRQLIMDRMKELRELVPDGGRCSIDNLLERTIKHMLYLRKITSQAEKLKRFANRTVGESKRQKMNGGHPGRSCAFDFESELAWPIVIEDLECTGHMLIEMICNEHGLFLEIAQVIRKLDITILKGILENRSSDSWACFIVEVPRGFHRMDVLCPLLHLLQLRRNPISYKS 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01497 690 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 174 IPR025610 -
Viun5g01497 690 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 310 685 IPR043561 GO:0003700|GO:0006355
Viun5g01497 690 MobiDBLite consensus disorder prediction 496 518 - -
Viun5g01497 690 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 509 558 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01497 Viun-Chr5 12116273 12121923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01497 9 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 30.680 2.81e-73 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01497 - - gmx:100820605 1037.71