Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01495 ATGGTTCCATTCAGCACTTTCATGGACCAACCTAACATTATTACAATGCTAATGTTCACAACTATGGCATTGTTGCTACGGGCCCAGGCCATGCGAAAGTGCGGGAATTGCGGTCCGAACCCGGTTCCATACCCATTAAGCACGGGACCCGATTGTGGTGACCCGTGGTACAGGATCCGGTGCACCGCGGGTACGCTCTGGTTAGATGCACTCGCCGGATCATCTTACGCGATCAGGTCTATTGACCCGTTCACTCGTCGGATCATAACCCGACCCGCCACGCTGGCTCCAAAAACGTGCGTGTCCACGGACTTCCACAGCGAAGGCATGCACCTGAACGAGACCCTTCCTTTCAGCGTGGCTTCCGGGAACACTGTTTTTCTCTTCAACTGCACCGCCCACGCGCCTTCGATGAACTGCTCCCCAAGCAGCGCGTGCCACAGTTATATTAAGGAGCACGCAGATTTCGGTGCGTGCGGGAGCGTGGCCGTTGGCACGTGCTGCGAGTACCGGACCGGTGGGGCCCGCAAAGAGTTCGCGATTCGCTTGCACGGCGGAGAGTGCGCGGCGTATGAGAGTTTTGTGGATTTCAACGGCACGGCGGCGACTGTGGGCAAGCGGTGGCCGGAGAGTGGGGTGGGGATCGAGTGGGTGGCACCACAGGAACCGGTTTGTAAGGTACCTATAGATTGCAAGGAATTGTTGAACTCGAAATGTGGAGTGGGGCCCAGGGATGGGGTGCAAAGGTGCTTCTGCAATGCTGGGTTTGGGTGGGACCCCATCAATGGTTCGTGTCAACCACAAACTCAGACACACAACAGAACGTGCACAGGACATGGGAAAGACAGCCACTGCAAAGTTCGAAAGAAAAAGAAGATGCTTGTGCCTGTGGTTGTTTCCATAGGAGGAATAGTCTTTGTTCTAGCAATCATAGGAGTGATTTTCTACAAGAAGCATAACCAAGCAAAAGGAAAAACAAAGGAGGCTAAAATCAGTAAGAGAAAAGAAGTCTCAAGTGTGAAAGCGAGTGCTTTATCATCCAGAATCTTCACTGGCAGAGAGATAAGAAAGGCAACGAACAATTTCTCCCGAGAAAACCTGATCGGAACTGGTGGATTCGGTGAAGTGTTCAAGGGGACATTCGATGATGGAACCGTCTTTGCAATCAAGCGTGCGAAGCTCGGAAGCACCAAAGGCATTGATCAGATGCAAAACGAGGTTCGAATTCTGTGCCAAGTAAACCACAGAAGCTTGGTGAGACTCCTTGGTTGTTGCTTGGAACTTGAACACCCTTTGCTGATATACGAGTACGTTTCAAATGGGACCCTTTTCGATTACCTTCATCGCCACTCTTGTGGCACAAGGGAACCCCTGAAACTGCACCAAAGACTCAAAATTGCGCACCAAACAGCTGAAGGGCTTTCGTATCTGCATTCTTCAGCGGTGCCACCCATTTACCACAGAGACGTGAAATCAAGCAACATTCTTCTTGATGACAAGCTTGATGCCAAGGTTTCTGACTTTGGGTTATCAAGGCTTGTTGAGTTGGCTGAAGAAAACAAGAGCCATATCTTCACCAGTGCCCAAGGGACACTGGGGTACCTAGATCCTGAGTACTATCGTAACTTTCAGTTGACTGATAAGAGCGATGTTTATAGCTTTGGAGTGGTGCTGATGGAGTTGCTCACTGCTCAGAAAGCCATTGATTTCAACAGGGAAGAAGAGAGTGTGAACTTGGCCATGTATGGGAAGAGGAAAATGGTTGAGGAGAAGTTGATGGATGTGGTTGATCCTTTGCTTAAAGAGGGAGCTAGTGATTTGGAATTGGAAACTATGAAGTCATTGGGGTATCTCGCAGTTTCATGCTTGGATGATCAGAGGCAGAAACGGCCTTCCATGAAAGAAGTTGCTGATGAGATTGAATACCTGATTAAAGCTGTCAAAGGTCAAGTTTCCAAACCATGA 1965 0.4967 MVPFSTFMDQPNIITMLMFTTMALLLRAQAMRKCGNCGPNPVPYPLSTGPDCGDPWYRIRCTAGTLWLDALAGSSYAIRSIDPFTRRIITRPATLAPKTCVSTDFHSEGMHLNETLPFSVASGNTVFLFNCTAHAPSMNCSPSSACHSYIKEHADFGACGSVAVGTCCEYRTGGARKEFAIRLHGGECAAYESFVDFNGTAATVGKRWPESGVGIEWVAPQEPVCKVPIDCKELLNSKCGVGPRDGVQRCFCNAGFGWDPINGSCQPQTQTHNRTCTGHGKDSHCKVRKKKKMLVPVVVSIGGIVFVLAIIGVIFYKKHNQAKGKTKEAKISKRKEVSSVKASALSSRIFTGREIRKATNNFSRENLIGTGGFGEVFKGTFDDGTVFAIKRAKLGSTKGIDQMQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYVSNGTLFDYLHRHSCGTREPLKLHQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVELAEENKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEESVNLAMYGKRKMVEEKLMDVVDPLLKEGASDLELETMKSLGYLAVSCLDDQRQKRPSMKEVADEIEYLIKAVKGQVSKP 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01495 654 FunFam Wall-associated receptor kinase-like 20 438 653 - -
Viun5g01495 654 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 643 IPR045274 GO:0007166
Viun5g01495 654 Gene3D Phosphorylase Kinase; domain 1 320 437 - -
Viun5g01495 654 Pfam Protein kinase domain 363 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01495 654 SUPERFAMILY Protein kinase-like (PK-like) 336 639 IPR011009 -
Viun5g01495 654 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 334 437 - -
Viun5g01495 654 ProSiteProfiles Protein kinase domain profile. 362 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01495 654 SMART serkin_6 362 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01495 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Viun5g01495 654 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Viun5g01495 654 CDD STKc_IRAK 368 641 - -
Viun5g01495 654 Gene3D Transferase(Phosphotransferase) domain 1 438 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01495 Viun-Chr5 12055665 12059400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01495 33 653 Receptor kinase-like Gene Family AT5G02070 54.992 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Viun5g01495 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01495 - - aprc:113862410 1040.02