Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01470 ATGGCCGCAAGTAAGGAAGAGTTAACCCTTCTGGGAGTTATGGGAAGCCCATTTCTGCACAGGGTTCAGATCGCTCTCAAATTGAAGGGAATAGAATACAAATACGTGGAAGATGATTTGAACAACAAGAGTGATCTTCTCCTCAAGTATAACCCAGTTTACAAAATGATTCCTGTGCTCGTTCACAACGACAACCCAATATCAGAGTCTGTTGTGATTCTTGAGTACATCGATGACGCATGGAAACACAACCCCATCTTGCCTTCAGATCCTTACCAGAGAGCCCAGGCTCGTTTCTGGGCCAAGTTCATCGACGACAAGTGTGTGGCTCCAGCATGGAAATCTGCCTTCATGGTTGATGAGACAGAGAAAGCAAAAGCTAAAGAAGAGTTATTTGAGGCTCTTGGGTTTCTAGAGAATGAGCTGAAGGGGAGGTTTTTTGGTGGGGATGAGATTGGTTTTGTGGATATTGCTGCAGTGTTCATACCTATTGTTCAAGTGATTGCAGGGTTGCCATTGTTCTCGAGTGAGAAATTTCCGAAGTTATTTCAATGGTGCCAAGACTTTCACAACCATCCACTGGTGAACGAGGTTCTGCCTACTAAAGACCAACTTTCTACCTATTTCAAGGCTCGGGTTCAAAGCCTTGCTCCTAAAAACAAAAATTAG 669 0.4395 MAASKEELTLLGVMGSPFLHRVQIALKLKGIEYKYVEDDLNNKSDLLLKYNPVYKMIPVLVHNDNPISESVVILEYIDDAWKHNPILPSDPYQRAQARFWAKFIDDKCVAPAWKSAFMVDETEKAKAKEELFEALGFLENELKGRFFGGDEIGFVDIAAVFIPIVQVIAGLPLFSSEKFPKLFQWCQDFHNHPLVNEVLPTKDQLSTYFKARVQSLAPKNKN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01470 222 SFLD Glutathione Transferase (cytosolic) 4 219 IPR040079 -
Viun5g01470 222 CDD GST_C_Tau 91 212 IPR045074 GO:0004364|GO:0006749
Viun5g01470 222 Pfam Glutathione S-transferase, C-terminal domain 118 193 IPR004046 -
Viun5g01470 222 CDD GST_N_Tau 8 81 - -
Viun5g01470 222 SUPERFAMILY GST C-terminal domain-like 79 214 IPR036282 -
Viun5g01470 222 SFLD Main.3: Omega- and Tau-like 4 219 IPR045073 -
Viun5g01470 222 FunFam Tau class glutathione S-transferase 1 89 - -
Viun5g01470 222 Gene3D Glutaredoxin 1 89 - -
Viun5g01470 222 FunFam Tau class glutathione S-transferase 87 219 - -
Viun5g01470 222 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Viun5g01470 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 209 IPR010987 -
Viun5g01470 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 204 IPR045073 -
Viun5g01470 222 Gene3D - 90 219 - -
Viun5g01470 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Viun5g01470 222 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01470 Viun-Chr5 11745731 11746858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01470 5 217 Glutathione S-transferase Gene Family AT3G09270 49.545 2.58e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01470 K00799 - gmx:548029 373.244