Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01467 ATGGGTTCAAGTGAGGAAGAGGTGACCCTTCTGGGAGTTATTGGAAGCCCATTTGTTTGCAGGGTGGAGATAGCCCTAAAGTTGAAGGGCGTTGAATACAAATACGTGGAAGAGAATTTGAGCAACAAGAGTGAAGAGCTTCTGAAATACAACCCAGTTCACAAGAAGGTCCCCATTTTTGTTCACAATGGGAAGTCCATAGGAGAGTCCCTTGTGATTGTTGAGTACATCGATGACACGTGGAAGAACAATCCCATCTTGCCTTCTGATTCGTACCAGAGAGCCCTGGCTCGTTTCTGGTCCAAATTCATTGATGACAAGGTGGTGAGGAGTTCATGGAAATCTGTTTTCACGGTTGACGAGAAATGGCGTCTGAAGAATGTTGCAGAAGCATATGAGAGTCTGCAGTTTCTTGAGAATGAGATAAAGGAGAAGAAGTTCTTTGGAGGAGAGAAGCTAGGGTTGGTAGATATTAGTGCTGTCTATGTTGCATATTGGATCCCTCTGATTCAAGAAATAGGAGGGATGGAGTTATTGACAACTCAGAAATTTCCTAATCTCTACAGGTGGAGCCAAGAATTTGTGAACCATCCAATTGTTAAAGAATGTCTTCCCCCAAGAGACCCAGTCATTGCCATTTTTAAAGGACGTTATGGAGGCCGTTTTGTTTCAAAATAG 678 0.4322 MGSSEEEVTLLGVIGSPFVCRVEIALKLKGVEYKYVEENLSNKSEELLKYNPVHKKVPIFVHNGKSIGESLVIVEYIDDTWKNNPILPSDSYQRALARFWSKFIDDKVVRSSWKSVFTVDEKWRLKNVAEAYESLQFLENEIKEKKFFGGEKLGLVDISAVYVAYWIPLIQEIGGMELLTTQKFPNLYRWSQEFVNHPIVKECLPPRDPVIAIFKGRYGGRFVSK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01467 225 FunFam Tau class glutathione S-transferase 1 89 - -
Viun5g01467 225 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Viun5g01467 225 FunFam Tau class glutathione S-transferase 87 222 - -
Viun5g01467 225 SFLD Main.3: Omega- and Tau-like 5 216 IPR045073 -
Viun5g01467 225 CDD GST_N_Tau 8 81 - -
Viun5g01467 225 Pfam Glutathione S-transferase, C-terminal domain 115 198 IPR004046 -
Viun5g01467 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Viun5g01467 225 Gene3D - 90 224 - -
Viun5g01467 225 SFLD Glutathione Transferase (cytosolic) 5 216 IPR040079 -
Viun5g01467 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 209 IPR045073 -
Viun5g01467 225 Gene3D Glutaredoxin 1 89 - -
Viun5g01467 225 SUPERFAMILY GST C-terminal domain-like 79 218 IPR036282 -
Viun5g01467 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 222 IPR010987 -
Viun5g01467 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Viun5g01467 225 CDD GST_C_Tau 92 217 IPR045074 GO:0004364|GO:0006749
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01467 Viun-Chr5 11698593 11699491 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01467 3 219 Glutathione S-transferase Gene Family AT3G09270 51.598 2.93e-80 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01467 K00799 - gmx:100500052 350.132