Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01463 ATGAGTAAGATGTATATGTCTCCAGGGGGATACATGCCCTTAATGCCTAATGGCACAAGCAACACGCAGAGTAGCATGCAGAGCATGATGCAGATGAGTTTCTACTGGGGCAAAGATGCCACAGTGCTTTTCCATGGTTGGCCTGGGACAAGTCCCCTTGTGGGAGGACTCATGCAAGCTTTTGTTCAGTTTTTTCGCATCAGCTTCGTTTACATGGTGATGCTTGCAGTCATGTCCTTCAATGGAGGAATATTCATAGCTGCTGTGGTCGGCCACACCTTGGGGTTCTTCATCGCCAAGTCTCGTGCTCTTGCTCTCGTCAATAAGGAAGAAGACAAAGGGTCTTCCTCGGTTAGGAACAATGTTTGA 369 0.4797 MSKMYMSPGGYMPLMPNGTSNTQSSMQSMMQMSFYWGKDATVLFHGWPGTSPLVGGLMQAFVQFFRISFVYMVMLAVMSFNGGIFIAAVVGHTLGFFIAKSRALALVNKEEDKGSSSVRNNV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01463 122 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 56 112 IPR007274 GO:0005375|GO:0016020|GO:0035434
Viun5g01463 122 Pfam Ctr copper transporter family 57 98 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01463 Viun-Chr5 11594885 11595539 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01463 29 104 Inorganic Solute Cotransporters AT5G59040 42.593 4.81e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01463 K14686 - gmx:100527849 138.272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01463 5 11594885 11595539 Viun5g01463 5 11594885 11595539 ECH