Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01462 ATGAGTAAGATGTATATGTCTCCAGGGGGATACATGCCCTTAATGCCTAATGGCACAAGCAACACGCAGAGTAGCATGCAGAGCATGATGCAGATGAGTTTCTACTGGGGCAAAGATGCCACAGTGCTTTTCCATGGTTGGCCTGGTAAGAGTGTTGGCATGTACATCTTAGCCATCGTATTTGTGTTTTTGTTAGCCATGGCTATTGAGGTTTTATCAAACCAACCACTCATTAAACCAGGGACAAGTCCCCTTGTGGGAGGACTCATGCAAGCTTTTGTTCAGTTTTTTCGCATCAGCTTCGTTTACATGGTGATGCTTGCAGTCATGTCCTTCAATGGAGGAATATTCATAGCTGCTGTGGTCGGCCACACCTTGGGGTTCTTCATCGCCAAGTCTCGTGCTCTTGCTCTCGTCAATAAGGAAGAAGACAAAGGGTCTTCCTCGGTTAGGAACAATGTTTGA 465 0.4602 MSKMYMSPGGYMPLMPNGTSNTQSSMQSMMQMSFYWGKDATVLFHGWPGKSVGMYILAIVFVFLLAMAIEVLSNQPLIKPGTSPLVGGLMQAFVQFFRISFVYMVMLAVMSFNGGIFIAAVVGHTLGFFIAKSRALALVNKEEDKGSSSVRNNV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01462 154 Pfam Ctr copper transporter family 32 73 IPR007274 GO:0005375|GO:0016020|GO:0035434
Viun5g01462 154 Pfam Ctr copper transporter family 85 130 IPR007274 GO:0005375|GO:0016020|GO:0035434
Viun5g01462 154 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 21 144 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01462 Viun-Chr5 11594885 11595539 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01462 29 136 Inorganic Solute Cotransporters AT5G59040 49.074 2.75e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01462 K14686 - gmx:100527849 203.756