Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01361 ATGTTTTGTAATTGTTTTGGTGCTTTGAATTGTTTTGGAAGGAGGGATGATCCAGCGGACCAGCCACATGAACAAGTTGTTGCAACTAAAAAGTTTACCTATAACTCATTGAGATCAGCAACAAACGATTTTCACCCATCGAGCAAAATTGGTGGAGGAGGTTATGGAGTTGTCCACAAGGGAGTTTTAAGGGATGGTACTCATGTTGCCATCAAGTCTCTTTCAGTTGAGTCTAAACAAGGGGCTCGTGAATTTATGACAGAAATTGATTTGATATCAAATATTCGACATCCAAATCTTGTGGAACTGATTGGCTGCTGCATTGAGGGTTCAAAGAGTAAATATGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATTTGTCGTGGCACAGCTTCTGGTCTACTTTTTCTTCATGAAGAGGCTCAACCAAACATTGTTCACAGGGATATCAAGGCCAGTAACATATTGTTGGATGGGAATTTTAATCCGAAAATTGGGGATTTTGGTCTTGCAAAACTTTTTCCGGACAATGTCACCCATGTTAGTACTAGAGTTGCAGGAACTGTGGGATATCTTGCACCAGAATATGCACTTCTGGGACAACTTACAAAGAAGGCAGACATTTACAGTTTTGGGATTCTCATGCTTGAAATAATCAGTGGGAAAAGTAGTAGCATAGCAGCATTTGATGAGGACTATCTGGTTTTAGTGGAATGGGCTTGGAAGCTGAAAGAAGAAAATAGGCTTCTAGACCTTGTTGATTCAGAATTAAGTGAGTATGATGAGAGTGAGGTGTATCGGTTCCTTGTGGTGGCTCTGTTTTGCACCCAATCAGCTTCTCAGCATAGACCAAGCATGAAACAAGTATTGGAAATGCTTTCCAGAGAAGTTCATCTTAACGAGAAGGCTTTGACTGAGCCTGGAATCTACAAATGGCAGAGCACTGGAAAAAGGGGTGGTTCTTTGAATGAGACATCATCTCAGGCAATCAAGCACAGAAAAACTGAAAATCCACATGAAGCAGCTTCAGCTCACTTCAGTGGTTCAGATATTGTGACAGAGATGCTTCCAAGATGA 1077 0.4141 MFCNCFGALNCFGRRDDPADQPHEQVVATKKFTYNSLRSATNDFHPSSKIGGGGYGVVHKGVLRDGTHVAIKSLSVESKQGAREFMTEIDLISNIRHPNLVELIGCCIEGSKSKYVALDWPKRAAICRGTASGLLFLHEEAQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADIYSFGILMLEIISGKSSSIAAFDEDYLVLVEWAWKLKEENRLLDLVDSELSEYDESEVYRFLVVALFCTQSASQHRPSMKQVLEMLSREVHLNEKALTEPGIYKWQSTGKRGGSLNETSSQAIKHRKTENPHEAASAHFSGSDIVTEMLPR 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01361 358 ProSiteProfiles Protein kinase domain profile. 44 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01361 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Viun5g01361 358 SMART serkin_6 44 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01361 358 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 20 117 - -
Viun5g01361 358 Gene3D Phosphorylase Kinase; domain 1 14 112 - -
Viun5g01361 358 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Viun5g01361 358 Pfam Protein kinase domain 124 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01361 358 FunFam Putative LRR receptor-like serine/threonine-protein kinase 103 305 - -
Viun5g01361 358 SUPERFAMILY Protein kinase-like (PK-like) 23 293 IPR011009 -
Viun5g01361 358 MobiDBLite consensus disorder prediction 315 358 - -
Viun5g01361 358 Gene3D Transferase(Phosphotransferase) domain 1 113 309 - -
Viun5g01361 358 CDD STKc_IRAK 50 295 - -
Viun5g01361 358 Pfam Protein tyrosine and serine/threonine kinase 47 112 IPR001245 GO:0004672|GO:0006468
Viun5g01361 358 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01361 Viun-Chr5 10291455 10295474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01361 27 308 Receptor kinase-like Gene Family AT1G56120 49.502 2.79e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun5g01361 Pkinase 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01361 - - gmx:100816683 636.336