Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01332 ATGGAGGGTCATCATCTCCATCACCATCACCATCAGCGGCAGCAGCATCAGCAACAACATCATCATCAGCAACAGCATCACCACCCTCACAACATCACAACCAGTGCTAACGTGGATGCCACAGACAGATTCCCCCAATGGAGCATCCAAGAGACAAAAGAGTTCCTCGTGATCCGTGCGGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAACAGCTTTGGGAAGTCATCTCCAACCGGATGAAGGAAAAGGGTTTCCATAGAAGTGCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTTACCCGCTATAAGGGGTGTGAAGCGATAGAGCCAGAGGCGATGAGGCAGCAATTCCCGTTCTACAACGAGGTTCAAGCGATTTTCGCGTCGAGGATGCAGAGAATGTTGTGGGCGGAAGCAGAAGGAGGAGGGTCGAAGAAGAAGGTGGTGCAGCTCTCGTCGGAGGAGGAGGAGGAGGGAAACGAAGAGAGTGAGGGAGATCAGAAGGGTAGCGTGATGAAAAAGAAGAAGAAGGGGAAGATGGTAATCGGAGGAGGGAGTGGTGGTAGTAATAACAGCAACATGGAGGGTTTGAAGGAGATGATGGAGGAGTTCATGAGGCAACAGATGCAGATGGAGGCACAGTGGATGGAGGCGTTTGAGGCAAGGGAGAACGAGAGGAGGATGAAGGAGATGGAGTGGAGGCAAACCATGGAGGCATTGGAGAATGAGAGGATGATGATGGACCAGAGATGGAGAGAGAGGGAAGAGCAACGAAGGATTAGGGAAGAACTTAGGGCTGAAAAAAGAGATGCTCTAATCACAGCACTTCTCAACAAGCTCAGAAGAGAAGAGATATAG 870 0.5034 MEGHHLHHHHHQRQQHQQQHHHQQQHHHPHNITTSANVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKQLWEVISNRMKEKGFHRSAEQCKCKWKNLVTRYKGCEAIEPEAMRQQFPFYNEVQAIFASRMQRMLWAEAEGGGSKKKVVQLSSEEEEEGNEESEGDQKGSVMKKKKKGKMVIGGGSGGSNNSNMEGLKEMMEEFMRQQMQMEAQWMEAFEARENERRMKEMEWRQTMEALENERMMMDQRWREREEQRRIREELRAEKRDALITALLNKLRREEI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01332 289 Coils Coil 258 278 - -
Viun5g01332 289 Pfam Myb/SANT-like DNA-binding domain 46 130 IPR044822 -
Viun5g01332 289 Coils Coil 198 218 - -
Viun5g01332 289 Gene3D - 47 108 - -
Viun5g01332 289 CDD GT1 45 110 - -
Viun5g01332 289 MobiDBLite consensus disorder prediction 1 28 - -
Viun5g01332 289 MobiDBLite consensus disorder prediction 1 30 - -
Viun5g01332 289 MobiDBLite consensus disorder prediction 149 197 - -
Viun5g01332 289 ProSiteProfiles Myb-like domain profile. 47 103 IPR001005 -
Viun5g01332 289 PANTHER FI21293P1 11 285 - -
Viun5g01332 289 FunFam Zinc finger and SCAN domain-containing 20 47 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01332 Viun-Chr5 9878836 9880771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01332 33 287 Trihelix Transcription Factor Family AT5G01380 51.418 3.77e-73 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Viun5g01332 Myb_DNA-bind_4 5.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01332 - - gmx:100778195 366.311