Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01330 ATGGCCAAACCAACTCATGCAAAACCTGGTTGCTTTTGTGATTTCTTTCAACTTCTCTTTTGTGCTGAGAATGGAAACACTTCTCAAATGCACCCTTTTTCTGACCCCATCACAAAACCATATGCATCAGAAACAGTGCATGGTCATAACAGTGATGATGCAATGGTGAATGCAACTAAACCAGGAGTTGTGGCAAGGCTAATGGGGCTTGATTCTCTGCCAAGTACCAACTTGGTATCAAACGCAAACATCCCAGATTCAGTTCCAAGAAGTAGGTCAGTGAACTTTGTGGATTACTTGCTCAAGTTTGACACAAGCCAAAACAATAACCATCACCAAGTGAAAACCTCAGCATCGTTCAGAGAGGTTCCTGCACCGTTTCAGCACAAAAGCAAAAGCCACGACCTTGTCGTGTTCTACTGGGATAGTGGGAGTGAAGATCACGAAATTGAACCCCTTTCGAGGATTCAAGAAATGGGGTTGGAAGAATCTAGAAACAGAAAGAAGCAGGGAAGCAAGAACAAGGAGATTGTTGGTGTGGCAGAGGAGAGGAACCTCATAAAGAGAAGGCAATTTTCAAAGTTCGAGAATGAGCCTAGAGTGGTTCCTCTTGGTTCCAAGGTTCGAAATCGCAATCAAGCTAAAGCTTTGGCACCAGTTTCTGGTAGTGGAAGAAAAGGTGGTAGTAGTAGCGGTCCTAGTGGGTTAAGAACAACCTCAACATTGCCGAATAAGCAGAAGAAAGTGCCCTCTGAACCAAAACGTTTGAAGAACACAAGAAAACAAGAGAAGATAGAGAGTGAATTTAGCTCAGAGAATTCCAGTGCAATCTCAGTCCTAGATGACTATGACTTCTCATTTCTTTATGGACCTGATTTTCCAGATTACAGAAACCACTTAAAGGCAAAGACAAAGTGGGAATTTTCAGAACTGTTATTGGATGATGATGTTGGAGACAGAAGAAGCAAGGATAAAGAATGTTCCTACCCTGACATCAACCAAAAAAAAGAGTGTTTATCAGAATTAAGGAAGAAGCTTTGCAAGTTTACAGAAGAGGATTTCAGAGAAACAGATTTCACAAGAAAAGGCGTGTGTGAGGGTGAAAATTATGAGGAAATTTGTTTGGAGTATGAGCATAAAATTTTTGACATTTTACTACACCAGGTTGTCAATGAACTTGTGGAACTTTCACATTGA 1197 0.411 MAKPTHAKPGCFCDFFQLLFCAENGNTSQMHPFSDPITKPYASETVHGHNSDDAMVNATKPGVVARLMGLDSLPSTNLVSNANIPDSVPRSRSVNFVDYLLKFDTSQNNNHHQVKTSASFREVPAPFQHKSKSHDLVVFYWDSGSEDHEIEPLSRIQEMGLEESRNRKKQGSKNKEIVGVAEERNLIKRRQFSKFENEPRVVPLGSKVRNRNQAKALAPVSGSGRKGGSSSGPSGLRTTSTLPNKQKKVPSEPKRLKNTRKQEKIESEFSSENSSAISVLDDYDFSFLYGPDFPDYRNHLKAKTKWEFSELLLDDDVGDRRSKDKECSYPDINQKKECLSELRKKLCKFTEEDFRETDFTRKGVCEGENYEEICLEYEHKIFDILLHQVVNELVELSH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01330 398 PANTHER OS05G0128300 PROTEIN 1 397 - -
Viun5g01330 398 MobiDBLite consensus disorder prediction 224 247 - -
Viun5g01330 398 MobiDBLite consensus disorder prediction 203 268 - -
Viun5g01330 398 MobiDBLite consensus disorder prediction 156 176 - -
Viun5g01330 398 Pfam DUF761-associated sequence motif 61 77 IPR032795 -
Viun5g01330 398 MobiDBLite consensus disorder prediction 248 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01330 Viun-Chr5 9857992 9859405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01330 1 393 TRM (TON1 Recruiting Motif) Superfamily AT5G01370 26.552 1.13e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01330 - - gmx:100775965 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01330 5 9857992 9859405 Viun5g01330 5 9857992 9859405 ECH