Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01294 ATGGCTTCTCAAGCTCTTCTTCTCTTTCTCCTCTTTCCCTTTCTCTTACACCAAACCAATGCTTTGATCTTTGAAGGCTTCGATGAAAACAGTGAAATAAGCCTCGAAGGATCTTCCATCATCAAAACCAGTCGTTTACTGAAACTCACCAACAGATCAACCAATATCATAGGCCATGCATTCTACAAAACACCCTTTCAAATGCTCAACATAACAGACCCTCCCCTTGAACCCTATGCTTTTTCCTTCACCACCTACTTTGTTTTCTCAATTGTATCCCCTAGTTCTGGTTCTGGTGGCTTTGGCCTTGCCTTCACCATAGCACCATCAACACACTTTCCTGAGGCTGATGCTGGCCACTATCTTGGTCTTTTTAACCCCTCCAATGATGGGAATGCCTCAAATCACATCTTTGCGGTGGAGTTTGACACTGTGAATGGTTACAAAGGTGACGCAGACACCGAAGGAAACCATGTTGGGGTGAATGTAAACGGAATGGACTCAGGGATTACTGAACCAGCTGCATACATTGAAGAGGGTACTGAGAGTGTAAAGGAGGATTTCAGAATGGCCAAGGTTGATGCTGTTCAAGCTTGGATAGAGTATGATGGTGAAAAGAGAATTCTGAATGTAACTATAGCTCCTTGGAAATTATCAAAACCCAGCACACCACTTATTAAGAACTACAACGTTGACCTTTCCAACGTTATGAAGGAAAACATGTTTGTCGGTTTCTCAGCATCAACTGGTTTGGAAACAAGCTCTCATTATCTTCTAGGGTGGAGTTTTGCAGTGAACGGTGTTGCGGCTTCGTTGAATATGTCTAATCTTCCAAAGCCACCACCCAAGGAGGAAGATCCATCGTCATTTCCTTGGGTCAACGTTGCAATTGGCATCTTGTCTGCTTTGACTTTGAGCCTTTTGTGTGTTCTAATTCTTCTGACATGTTACAAGAGATACATGGATTTTGAGGTTCTTGAGGACTGGGAAATGGATTGTCCTCACAGGTTCAGATACAAAGATCTTCACCTTGCCACAAAAGGGTTCAAAGAGAGTCAACTAATTGGAATTGGAGGGTTTGGTGCTGTGTACAAGGGTGTGTTACCAAGTTCAGGAACTGAAGTTGCTGTTAAGAGGATTGTGAGAAGCCCTTTCCACGGAATGAGGGAATTTGCAGCTGAGATAGAAAGCTTGGGAAGGTTGAGACACAAAAATTTGGTGAACCTTCAGGGATGGTGCAAGAAAAAGAATGATCTCCTTCTAGTCTATGATTTCATTACAAACGGAAGCCTTGATTGTGTCCTATACAAACCCAACAACAACGTTGTATTGAACTGGGGGCAAAGATTCAACATTCTCAAAGGAATCAGTGCTGGACTATTGTACTTGCATGAAGAGTGGGAGCAAGTGGTGATCCATAGAGACGTGAAAACTAGTAACATTCTGATAGATGGAAACTTGAATGCTCGTTTAGGTGATTTTGGACTTGCAAGGCTCTATAACCATGGTGAAGTATCACACACAACGAGTGTGGTTGGAACCATTGGGTACATTGCACCAGAGTTAACTCGCACGGGAAAAGCTTCTACAAGAACTGATGTGTATGCATTTGGGGTTGTGCTCCTTGAAGTGGTGACGGGTAAGAGGCCTCTTGATTCGGATCAGTTTTTCTTGGTGGAATGGGCGATTGAGAACTACCATTTGGGTCAGATTCTTGAGGTGGTTGATCCTAAGCTGGATTCAGTTTATGATGAGGAAGAAGTTGAGTTGGTTCTGAAGTTGGGTTTACTATGCACTCAACATAGATCAGATTGTAGACCTAGCATGAAACAAGTTACGAGGTATCTGAACTTTGATGACCCTCTTCCTGATATTGGTGATTTGGGATATGGTGGTTATTCTAATGGCAGCAGCAGAATGAACTCGGGTTTCTTAGAAGTCACGCCATCTTTGAGAACTGTTGAAACTTCTGGGTATTTGTCCTCCATGAGCATGAGTACCAAGTCCTTGGATGCTGGTAGATAG 2025 0.4306 MASQALLLFLLFPFLLHQTNALIFEGFDENSEISLEGSSIIKTSRLLKLTNRSTNIIGHAFYKTPFQMLNITDPPLEPYAFSFTTYFVFSIVSPSSGSGGFGLAFTIAPSTHFPEADAGHYLGLFNPSNDGNASNHIFAVEFDTVNGYKGDADTEGNHVGVNVNGMDSGITEPAAYIEEGTESVKEDFRMAKVDAVQAWIEYDGEKRILNVTIAPWKLSKPSTPLIKNYNVDLSNVMKENMFVGFSASTGLETSSHYLLGWSFAVNGVAASLNMSNLPKPPPKEEDPSSFPWVNVAIGILSALTLSLLCVLILLTCYKRYMDFEVLEDWEMDCPHRFRYKDLHLATKGFKESQLIGIGGFGAVYKGVLPSSGTEVAVKRIVRSPFHGMREFAAEIESLGRLRHKNLVNLQGWCKKKNDLLLVYDFITNGSLDCVLYKPNNNVVLNWGQRFNILKGISAGLLYLHEEWEQVVIHRDVKTSNILIDGNLNARLGDFGLARLYNHGEVSHTTSVVGTIGYIAPELTRTGKASTRTDVYAFGVVLLEVVTGKRPLDSDQFFLVEWAIENYHLGQILEVVDPKLDSVYDEEEVELVLKLGLLCTQHRSDCRPSMKQVTRYLNFDDPLPDIGDLGYGGYSNGSSRMNSGFLEVTPSLRTVETSGYLSSMSMSTKSLDAGR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01294 674 ProSiteProfiles Protein kinase domain profile. 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01294 674 PANTHER - 18 618 - -
Viun5g01294 674 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Viun5g01294 674 SMART serkin_6 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01294 674 Gene3D - 21 266 - -
Viun5g01294 674 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun5g01294 674 SUPERFAMILY Protein kinase-like (PK-like) 332 618 IPR011009 -
Viun5g01294 674 CDD STKc_IRAK 355 617 - -
Viun5g01294 674 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Viun5g01294 674 CDD lectin_legume_LecRK_Arcelin_ConA 23 267 IPR001220 GO:0030246
Viun5g01294 674 Pfam Legume lectin domain 23 278 IPR001220 GO:0030246
Viun5g01294 674 Gene3D Transferase(Phosphotransferase) domain 1 426 623 - -
Viun5g01294 674 FunFam L-type lectin-domain containing receptor kinase S.4 426 627 - -
Viun5g01294 674 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 282 IPR013320 -
Viun5g01294 674 FunFam L-type lectin-domain containing receptor kinase V.9 18 271 - -
Viun5g01294 674 FunFam Lectin-domain containing receptor kinase VI.3 334 425 - -
Viun5g01294 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01294 Viun-Chr5 9406261 9408453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01294 22 643 Receptor kinase-like Gene Family AT5G01560 50.551 0.0 619
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Viun5g01294 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01294 - - gmx:100802724 1106.66