Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01256 ATGCATTTGCCCGTCACCTTTATACGCCTCTGCTTCACACTGAATTCTGACCCTTCATATCTTTCTACAAAAAAAAAAAAAAGCTTCTTTCTTCTCTCCCTCGTTTCTTTTCTCCTGATTATCATCTGGGTATTCCCTGGATTTTTCAGGGGTGCCCTGGTTTTCTTCATTGGAAATTGCTGTCACTGGGTCGCAAACATGGGAGGCTGTTGCAGCCACGAAGTCTCGGTTCGAGGGAAGGTGGAAACCGAGATGGATGATAAAGAATATGAGTGTGATCATGAAAATGATGAGTCTTATGAACGTGGTGGAGCATTGGTGAGGTTAAGAGGATCTTCCAAGTTTGTTTCAATGCACACCCAACAGGGCCAGAAAGGTGTGAACCAAGATGCAATGACAGTTTGGGAGGGCTTCACAGGAGAAAAGGATGTGATTTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAGTTTATTCGTGATAATCTGCCCTCAAAACTGTCTGCAGCAATCGAAGTTTCACAACAGAAGACAATAAAGTTTTATGATGCCAATGATGCAGAAACTGCTAGTTTTGATGATGGCTACGATGAGAGTAACCACATGTCCCTTGCTTCATGGGAGGGATGCTTTCTGAAATCCTTCGATGAGATGGATGAGCACCTTGCTCGGGAAATTAACACTGACAGCTATTGCAGTGGTTGCACCGCTGTGACTTTAATTAAACAGGGTGACCAGCTGATAGTTGGCAATTTGGGTGATTCTCGTGCAGTTCTTTGCACAAGGGACAGGGACCAACTCGTTGCTGTTCAACTCACTGTTGACTTGAAACCAGAAATTCCAAGTGAAACCTCTAGAATCGTTAACTGTGAAGGAAGAGTGTTTGCAGCAGAAGAAGAACCAGATGTGTACAGAATATGGATGCCTGATGATGACTGCCCTGGACTGGCCATGTCAAGAGCCTTTGGAGACTTTTGCCTCAAAGATTATGGCCTCATATCAGTTCCTGATGTATTTTACAGAAAAATTACCCCACAAGATCAATTTGTGGTTTTGGCAACTGATGGGATATGGGATGTGCTCACTAACCATGAAGTAGTAAGCATAGTTGCTTCAGCACCAAGGAGGTCTATCGCAGCCAAGTTGTTAGTAAAGCGTGCTGTAAAAGCTTGGAGATACAAGTATCCTGGTTCCAAGGTTGATGATTGTGCTGCCATATGTTTCTTTCTGAATGAACAACCTGTTCAATCCAATTCACAATCCCACATGAGTAGAAAAAATAGACAGTGCAGCAAGAACTTGCATCGCTCTAAAACCACTAGAAATGAAGACACTGACACAGTGGATGGCAAGGTTGGGTTGGAAATAGATGAAGAATGGAAAGCTCTTGGAGGGTTTTCCAGAGCCAACTCTTTGTCAAAACTTCCACGCCTTGCTAGGGCTATGAGTAAACGGCAATCGTCCAAGTACTATTCACCACGTTGA 1500 0.438 MHLPVTFIRLCFTLNSDPSYLSTKKKKSFFLLSLVSFLLIIIWVFPGFFRGALVFFIGNCCHWVANMGGCCSHEVSVRGKVETEMDDKEYECDHENDESYERGGALVRLRGSSKFVSMHTQQGQKGVNQDAMTVWEGFTGEKDVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIEVSQQKTIKFYDANDAETASFDDGYDESNHMSLASWEGCFLKSFDEMDEHLAREINTDSYCSGCTAVTLIKQGDQLIVGNLGDSRAVLCTRDRDQLVAVQLTVDLKPEIPSETSRIVNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLISVPDVFYRKITPQDQFVVLATDGIWDVLTNHEVVSIVASAPRRSIAAKLLVKRAVKAWRYKYPGSKVDDCAAICFFLNEQPVQSNSQSHMSRKNRQCSKNLHRSKTTRNEDTDTVDGKVGLEIDEEWKALGGFSRANSLSKLPRLARAMSKRQSSKYYSPR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01256 499 CDD PP2Cc 115 415 IPR001932 -
Viun5g01256 499 SUPERFAMILY PP2C-like 111 417 IPR036457 -
Viun5g01256 499 ProSiteProfiles PPM-type phosphatase domain profile. 115 415 IPR001932 -
Viun5g01256 499 Pfam Protein phosphatase 2C 122 391 IPR001932 -
Viun5g01256 499 SMART PP2C_4 101 413 IPR001932 -
Viun5g01256 499 MobiDBLite consensus disorder prediction 423 452 - -
Viun5g01256 499 PANTHER PROTEIN PHOSPHATASE 101 413 IPR015655 GO:0004722|GO:0006470
Viun5g01256 499 Gene3D - 106 418 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01256 Viun-Chr5 9039186 9042595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01256 67 419 PP2C-type Phosphatase Gene Family AT5G01700 54.108 2.52e-133 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01256 - - vun:114185420 987.638
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g01256 5 9039186 9042595 Viun5g01256 5 9039186 9042595 ECH