Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun5g01243 | ATGACCATGGGTGATCATAACAGTAACTGGGGAACTTCTGAATATAATCATCATCAACTTGGACTTGATGTTCCAAAGTTCAAGTCTGTTCAACCTCCTTCTCTACCTTTCTCTCCCTCTCCAGCCTCCCCTTCTTCTTACTTGGCCTTTTCTTCTGCTTTCAGCCCATCTGAGTTCTTCAACCCTTCTTTGTTTCTGCCTTCTCCAAAAATTTTTGCATCTCCGACTACTGAAGCTTTGGCTGCCCAGACCTTCAACTGTTCAGGAGAAGAACAACAACAACAACAACGTCACAAGGAGGATGAGAAAAACTTCTCGGACTTCTCTTTCCAAACCCAAATCCAATCTTCCTCAGGCATGCTTCAAGTGCAGGAACCTCTTAAGAAGCAAGATATATGGAAATTCAATGAACCTTCAAAGCGAACCGATTATTCATCTGAGAGGACAGCAACAAAATCTGAATACCCTTCGATTCAGAGCTTTTCCTCAGAAATGGCATCAGGCAAAGCAGAACTACAAAGCAATTCAGTTCCTGGGTCTGGTCATTTTGATTACGCCAATGCATCTCAGTCTGTTAGAGAACAAAAGAGATCAGAAGACGGATTCAACTGGAGAAAATATGGACAGAAACAAGTGAAAGGGAGTGAAAATCCTCGTAGTTATTACAAGTGCACACATCCAAATTGCTCAGTGAAGAAGAAAGTTGAGAAGTCTTTGGATGGCCAAATCACTGAAATAGTGTACAAGGGCCATCATAACCACCCAAAACCACAGTCTATTAGAAGAGGAAGCTCTCAATCAATTCATCAACCTTCTTCATCTTGCACAAACTCGGGGATTTCTGATCAATCAGTGGTGACCCTAAGCAATCCACAAATGGATCATTTCTCCATGCAGGAAGATTCTTCAGCTTCTGTAGGAGAGGAAGAGTTTGAACAAACATCCCAAACCAGTTATTCTGGGGGAGATGAAGATAACCTTGGACCACAGTCCAAAAGATGGAAAGGAGATAATGAAAACGATGACTATTCGGCCGCAGGGAGTAGAACTGTGAGAGAGCCTAGAGTTGTAGTTCAAACCACAAGCGAAATTGATATACTTGATGATGGCTTTAGGTGGAGGAAATATGGACAGAAAGTAGTGAAAGGAAACCCAAATGCGAGGAGCTATTACAAATGCACAGCCCCTGGTTGTTCAGTGAGAAAACATGTTGAGAGAGCTGCACATGATATCAAAGCTGTGATTACAACTTATGAAGGGAAACACAACCATGATGTGCCTGCTGCACGTGGTAGCGCAAGTTATAACATGAACAAAAATTCTCTGAACAGCAACATATCAGCTCCTATAAGACCCTCTGCAGTGAACTGTTATTCTAACTCATCAGGTTTAAAAAATTCTCTCTACAATAATACCAGGCTTCCAGCAACCGGAAATCAAGAATCTTTTGCACTGGACAAGTTCCAGAACCCTGGTAGTTTTGGCCAATCGGGTCCAAACAAATCAATGGGTTCATACAACGATCATGCACCGTACTCGCATGCTACATTCTCAAATGCCAAGGATGAGAGAAAGGATGACTCCTTCCTTCAGTCATTTCTGTCAAAGGACTTCTGA | 1617 | 0.423 | MTMGDHNSNWGTSEYNHHQLGLDVPKFKSVQPPSLPFSPSPASPSSYLAFSSAFSPSEFFNPSLFLPSPKIFASPTTEALAAQTFNCSGEEQQQQQRHKEDEKNFSDFSFQTQIQSSSGMLQVQEPLKKQDIWKFNEPSKRTDYSSERTATKSEYPSIQSFSSEMASGKAELQSNSVPGSGHFDYANASQSVREQKRSEDGFNWRKYGQKQVKGSENPRSYYKCTHPNCSVKKKVEKSLDGQITEIVYKGHHNHPKPQSIRRGSSQSIHQPSSSCTNSGISDQSVVTLSNPQMDHFSMQEDSSASVGEEEFEQTSQTSYSGGDEDNLGPQSKRWKGDNENDDYSAAGSRTVREPRVVVQTTSEIDILDDGFRWRKYGQKVVKGNPNARSYYKCTAPGCSVRKHVERAAHDIKAVITTYEGKHNHDVPAARGSASYNMNKNSLNSNISAPIRPSAVNCYSNSSGLKNSLYNNTRLPATGNQESFALDKFQNPGSFGQSGPNKSMGSYNDHAPYSHATFSNAKDERKDDSFLQSFLSKDF | 538 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun5g01243 | 538 | SMART | WRKY_cls | 198 | 256 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | SMART | WRKY_cls | 367 | 426 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 172 | 224 | - | - | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 172 | 192 | - | - | |
Viun5g01243 | 538 | Gene3D | WRKY domain | 184 | 258 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | Pfam | WRKY DNA -binding domain | 199 | 255 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | Pfam | WRKY DNA -binding domain | 368 | 424 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 298 | 348 | - | - | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 485 | 514 | - | - | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 249 | 282 | - | - | |
Viun5g01243 | 538 | SUPERFAMILY | WRKY DNA-binding domain | 359 | 427 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 106 | 443 | IPR044810 | GO:0003700 | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 298 | 325 | - | - | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 259 | 282 | - | - | |
Viun5g01243 | 538 | ProSiteProfiles | WRKY domain profile. | 193 | 257 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | ProSiteProfiles | WRKY domain profile. | 362 | 427 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 485 | 525 | - | - | |
Viun5g01243 | 538 | SUPERFAMILY | WRKY DNA-binding domain | 194 | 257 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | Gene3D | WRKY domain | 354 | 420 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Viun5g01243 | 538 | MobiDBLite | consensus disorder prediction | 328 | 348 | - | - | |
Viun5g01243 | 538 | FunFam | WRKY transcription factor | 187 | 258 | - | - | |
Viun5g01243 | 538 | FunFam | WRKY transcription factor 33 | 354 | 420 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun5g01243 | Viun-Chr5 | 8948916 | 8952011 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun5g01243 | 22 | 460 | WRKY Transcription Factor Family | AT2G38470 | 48.667 | 4.78e-111 | 338 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Viun5g01243 | WRKY | 1e-23 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun5g01243 | K13424 | - | gmx:100776837 | 875.93 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun5g01243 | 5 | 8948916 | 8952011 | Viun5g01243 | 5 | 8948916 | 8952011 | ECH |