Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g01204 ATGGATACTACTCTTTTCTCCATGAACAAACCAACAACCTTAAAAATTCACTTCTTCTTATTCTTATGCTTCTTCATTGGGATAGTTTCATCCCAATTGTCCTCTGATTTTTACTCCACAACCTGTCCTAATGCACTTTCAACCATTAAGAGTGGAGTGGATTCTGCAGTCAGCAATGAAGCTCGCATGGGGGCATCCCTCCTACGTCTCCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCCTCAGTGCTATTAAATGATACATCAAGTTTCACAGGTGAACAATCAGCAGGACCCAACGTGAATTCCATAAGGGGTTTTGGTGTAATAGACAGCATTAAGTCTGAATTGGAAAGCTTGTGCCCTGGTGTTGTTTCTTGTGCTGATATTCTCGCTGTAGCAGCAAGAGACTCAGTCGTTGCTCTTGGTGGACAAAGCTGGACAGTGCAACTGGGCAGAAGAGACTCAACCACAGCAAGTTTCAGTGGTGCAAACTCAGACTTACCTGGTTTTTCTTTCAGTCTACAGCAACTTATCGATGCTTTCTCCAAAAAAGATTTCACCACAGAAGAAATGGTTACCCTGTCAGGAGGGCACACAATTGGGCAAGCTAGTTGTTCAACTTTCAGAACAAGGATTTACAACGACACCAACATAGATTCCTCGTTTGCAACATCGTTGCAAGCAAATTGTCCTAGCGTAGGCGGTGACAGAAATTTGGCTCCTCTTGACACCTCTCCGACCACCTTTGACAATGCTTATTTCCAGGATCTGCAGAGCCAGAAGGGTCTCTTGCACTCAGATCAAGAGCTTTTCAATGGAGGATCCACTGATTCTCAAGTAAATGGTTATGTCAGCAACCCTTCAAGTTTTCAAACTGATTTTGCCAATGCAATGGTGAAAATGGGAAACCTTAGTCCACTCACTGGGTCCAGTGGCGAAATCAGGACCAACTGTTGGAAGACCAATTAA 975 0.4359 MDTTLFSMNKPTTLKIHFFLFLCFFIGIVSSQLSSDFYSTTCPNALSTIKSGVDSAVSNEARMGASLLRLHFHDCFVQGCDASVLLNDTSSFTGEQSAGPNVNSIRGFGVIDSIKSELESLCPGVVSCADILAVAARDSVVALGGQSWTVQLGRRDSTTASFSGANSDLPGFSFSLQQLIDAFSKKDFTTEEMVTLSGGHTIGQASCSTFRTRIYNDTNIDSSFATSLQANCPSVGGDRNLAPLDTSPTTFDNAYFQDLQSQKGLLHSDQELFNGGSTDSQVNGYVSNPSSFQTDFANAMVKMGNLSPLTGSSGEIRTNCWKTN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g01204 324 PANTHER PEROXIDASE 72-RELATED 25 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 Gene3D - 36 320 - -
Viun5g01204 324 FunFam Peroxidase 170 303 - -
Viun5g01204 324 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Viun5g01204 324 Gene3D Peroxidase, domain 2 170 303 - -
Viun5g01204 324 Pfam Peroxidase 51 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 SUPERFAMILY Heme-dependent peroxidases 32 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 FunFam Peroxidase 36 179 - -
Viun5g01204 324 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 ProSiteProfiles Plant heme peroxidase family profile. 32 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun5g01204 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Viun5g01204 324 CDD secretory_peroxidase 32 323 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g01204 Viun-Chr5 8564281 8566140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g01204 28 324 Peroxidase AT5G05340 65.000 5.89e-143 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g01204 K00430 - gmx:100815671 544.658